Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.68□□□□□ -0.06
HLA-CQ95604 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-CQ95604 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-CQ95604 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-CQ95604 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-CQ95604 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-CQ95604 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-CQ95604 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-CQ95604 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-CQ95604 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-CQ95604 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-CQ95604 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-CQ95604 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-CQ95604 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-CQ95604 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-CQ95604 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-CQ95604 AP005117.1-202ENST00000581724 1908 ntBASIC14.67□□□□□ -0.06
HLA-CQ95604 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-CQ95604 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-CQ95604 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-CQ95604 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-CQ95604 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC14.67□□□□□ -0.06
HLA-CQ95604 AL392088.1-201ENST00000428364 670 ntBASIC14.67□□□□□ -0.06
HLA-CQ95604 RPL18AP15-201ENST00000430258 517 ntBASIC14.67□□□□□ -0.06
HLA-CQ95604 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-CQ95604 AC007041.1-201ENST00000438989 1155 ntBASIC14.67□□□□□ -0.06
HLA-CQ95604 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-CQ95604 RPL29P2-201ENST00000488409 460 ntBASIC14.67□□□□□ -0.06
HLA-CQ95604 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC14.67□□□□□ -0.06
HLA-CQ95604 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC14.67□□□□□ -0.06
HLA-CQ95604 AL359219.1-201ENST00000556311 934 ntBASIC14.67□□□□□ -0.06
HLA-CQ95604 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC14.67□□□□□ -0.06
HLA-CQ95604 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.67□□□□□ -0.06
HLA-CQ95604 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.67□□□□□ -0.06
HLA-CQ95604 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-CQ95604 AC010531.8-201ENST00000623341 685 ntBASIC14.67□□□□□ -0.06
HLA-CQ95604 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-CQ95604 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
HLA-CQ95604 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-CQ95604 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-CQ95604 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-CQ95604 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-CQ95604 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HLA-CQ95604 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-CQ95604 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-CQ95604 LINC00115-201ENST00000473798 1317 ntBASIC14.66□□□□□ -0.06
HLA-CQ95604 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
HLA-CQ95604 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-CQ95604 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
HLA-CQ95604 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-CQ95604 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
HLA-CQ95604 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-CQ95604 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
HLA-CQ95604 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HLA-CQ95604 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HLA-CQ95604 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-CQ95604 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 CFL1P6-201ENST00000400899 494 ntBASIC14.66□□□□□ -0.06
HLA-CQ95604 FTH1P18-201ENST00000412071 549 ntBASIC14.66□□□□□ -0.06
HLA-CQ95604 AL954722.1-201ENST00000431238 259 ntBASIC14.66□□□□□ -0.06
HLA-CQ95604 RNU1-80P-201ENST00000459500 161 ntBASIC14.66□□□□□ -0.06
HLA-CQ95604 AC022447.5-201ENST00000504817 392 ntBASIC14.66□□□□□ -0.06
HLA-CQ95604 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
HLA-CQ95604 MST1L-204ENST00000545160 559 ntTSL 4 BASIC14.66□□□□□ -0.06
HLA-CQ95604 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.66□□□□□ -0.06
HLA-CQ95604 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-CQ95604 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC14.66□□□□□ -0.06
HLA-CQ95604 KRT8P34-201ENST00000577607 1044 ntBASIC14.66□□□□□ -0.06
HLA-CQ95604 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-CQ95604 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC14.66□□□□□ -0.06
HLA-CQ95604 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-CQ95604 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-CQ95604 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-CQ95604 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HLA-CQ95604 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HLA-CQ95604 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HLA-CQ95604 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-CQ95604 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-CQ95604 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms