Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 LBH-204ENST00000406087 559 ntTSL 4 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 NUS1P3-201ENST00000423502 862 ntBASIC10.82□□□□□ -0.68
NUP35Q8NFH5 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 GLI4-203ENST00000517468 963 ntTSL 5 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 TSFM-210ENST00000550559 897 ntTSL 5 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 AC104692.2-201ENST00000603054 253 ntBASIC10.82□□□□□ -0.68
NUP35Q8NFH5 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC10.82□□□□□ -0.68
NUP35Q8NFH5 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 MSNP1-201ENST00000511640 1732 ntBASIC10.81□□□□□ -0.68
NUP35Q8NFH5 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 SLC9A3P3-201ENST00000457608 2229 ntBASIC10.81□□□□□ -0.68
NUP35Q8NFH5 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 RERG-209ENST00000546331 1383 ntTSL 2 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 GOLGA6L17P-202ENST00000614358 1398 ntBASIC10.81□□□□□ -0.68
NUP35Q8NFH5 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 PHB-210ENST00000511832 1509 ntTSL 2 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 SERF2-209ENST00000409646 559 ntTSL 4 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms