Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 TUBB8P4-201ENST00000511806 1324 ntBASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 SNX29P1-201ENST00000548357 1007 ntBASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 AC133552.6-201ENST00000613406 534 ntBASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TTC9CQ8N5M4 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TTC9CQ8N5M4 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
TTC9CQ8N5M4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TTC9CQ8N5M4 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
TTC9CQ8N5M4 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
TTC9CQ8N5M4 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
TTC9CQ8N5M4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
TTC9CQ8N5M4 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TTC9CQ8N5M4 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
TTC9CQ8N5M4 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
TTC9CQ8N5M4 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TTC9CQ8N5M4 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC11.46□□□□□ -0.58
TTC9CQ8N5M4 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TTC9CQ8N5M4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TTC9CQ8N5M4 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC11.46□□□□□ -0.58
TTC9CQ8N5M4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
TTC9CQ8N5M4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 KRT8P24-201ENST00000560290 1559 ntBASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 TMBIM7P-202ENST00000641474 1516 ntBASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms