Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRIM50Q86XT4 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 AC011498.7-201ENST00000624986 2027 ntBASIC16.06■□□□□ 0.16
TRIM50Q86XT4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.06■□□□□ 0.16
TRIM50Q86XT4 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 RPSAP31-201ENST00000416648 895 ntBASIC16.06■□□□□ 0.16
TRIM50Q86XT4 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 AC114947.1-202ENST00000514136 344 ntBASIC16.06■□□□□ 0.16
TRIM50Q86XT4 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 RN7SL736P-201ENST00000613111 269 ntBASIC16.06■□□□□ 0.16
TRIM50Q86XT4 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM50Q86XT4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 MARK2P16-201ENST00000605714 1723 ntBASIC16.05■□□□□ 0.16
TRIM50Q86XT4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.05■□□□□ 0.16
TRIM50Q86XT4 AL627422.1-201ENST00000434104 580 ntBASIC16.05■□□□□ 0.16
TRIM50Q86XT4 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 AC253536.4-201ENST00000440539 267 ntBASIC16.05■□□□□ 0.16
TRIM50Q86XT4 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 MRPL22P1-201ENST00000505398 616 ntBASIC16.05■□□□□ 0.16
TRIM50Q86XT4 ALG1L13P-202ENST00000519320 584 ntBASIC16.05■□□□□ 0.16
TRIM50Q86XT4 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 KRT8P1-201ENST00000557533 1207 ntBASIC16.05■□□□□ 0.16
TRIM50Q86XT4 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 RPL17P45-201ENST00000586289 509 ntBASIC16.05■□□□□ 0.16
TRIM50Q86XT4 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 AC084781.1-201ENST00000613737 656 ntBASIC16.05■□□□□ 0.16
TRIM50Q86XT4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 CICP24-201ENST00000605464 2705 ntBASIC16.05■□□□□ 0.16
TRIM50Q86XT4 SBF1P1-201ENST00000444527 5631 ntBASIC16.05■□□□□ 0.16
TRIM50Q86XT4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM50Q86XT4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms