Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 TBC1D3J-201ENST00000620719 1426 ntBASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.38□□□□□ -0.27
H3F3CQ6NXT2 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 LINC00552-201ENST00000625151 2579 ntBASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 AGGF1P1-201ENST00000509500 2073 ntBASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 AC232323.1-201ENST00000540724 2099 ntBASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 BANF1P3-201ENST00000412556 261 ntBASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 AC008723.1-201ENST00000506922 207 ntBASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 AC005586.2-201ENST00000563946 837 ntBASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 RN7SL190P-201ENST00000582519 257 ntBASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 LINC01783-202ENST00000614408 828 ntBASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 BX284668.2-205ENST00000619677 828 ntBASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 AL591471.1-201ENST00000621855 229 ntBASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 AL353726.2-201ENST00000623259 884 ntBASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 FGD5P1-202ENST00000614866 2498 ntBASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.37□□□□□ -0.27
H3F3CQ6NXT2 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 AC015909.3-201ENST00000572855 1794 ntBASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.36□□□□□ -0.27
H3F3CQ6NXT2 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms