Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
PRICKLE4Q2TBC4 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.39□□□□□ -0.27
PRICKLE4Q2TBC4 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PRICKLE4Q2TBC4 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.39□□□□□ -0.27
PRICKLE4Q2TBC4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.39□□□□□ -0.27
PRICKLE4Q2TBC4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 RN7SKP214-201ENST00000364208 315 ntBASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 AC016700.1-201ENST00000429424 312 ntBASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 TSPY25P-201ENST00000429463 745 ntBASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 TMEM198B-204ENST00000484016 896 ntBASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 ZNF767P-206ENST00000513792 565 ntBASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 MIR3188-201ENST00000583494 85 ntBASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 AL645939.5-201ENST00000606834 243 ntBASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 AC026740.1-201ENST00000607068 791 ntBASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 BEND3P1-201ENST00000421591 1944 ntBASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRICKLE4Q2TBC4 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 AC103592.1-201ENST00000394513 664 ntBASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 EIF4HP1-201ENST00000453115 687 ntBASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms