Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.66■□□□□ 0.42
ATP2B3Q16720 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP2B3Q16720 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ATP2B3Q16720 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP2B3Q16720 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP2B3Q16720 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP2B3Q16720 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP2B3Q16720 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.66■□□□□ 0.42
ATP2B3Q16720 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
ATP2B3Q16720 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC17.66■□□□□ 0.42
ATP2B3Q16720 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ATP2B3Q16720 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.65■□□□□ 0.42
ATP2B3Q16720 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP2B3Q16720 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ATP2B3Q16720 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP2B3Q16720 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.65■□□□□ 0.42
ATP2B3Q16720 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.65■□□□□ 0.42
ATP2B3Q16720 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.65■□□□□ 0.42
ATP2B3Q16720 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP2B3Q16720 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP2B3Q16720 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP2B3Q16720 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP2B3Q16720 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP2B3Q16720 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP2B3Q16720 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP2B3Q16720 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.65■□□□□ 0.42
ATP2B3Q16720 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC17.65■□□□□ 0.42
ATP2B3Q16720 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP2B3Q16720 MAGEA5-201ENST00000446757 942 ntBASIC17.65■□□□□ 0.42
ATP2B3Q16720 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17.65■□□□□ 0.42
ATP2B3Q16720 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.65■□□□□ 0.42
ATP2B3Q16720 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP2B3Q16720 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP2B3Q16720 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
ATP2B3Q16720 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.65■□□□□ 0.42
ATP2B3Q16720 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.65■□□□□ 0.42
ATP2B3Q16720 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.65■□□□□ 0.42
ATP2B3Q16720 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC17.65■□□□□ 0.42
ATP2B3Q16720 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP2B3Q16720 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ATP2B3Q16720 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP2B3Q16720 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP2B3Q16720 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ATP2B3Q16720 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP2B3Q16720 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP2B3Q16720 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
ATP2B3Q16720 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP2B3Q16720 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP2B3Q16720 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP2B3Q16720 MYO15B-237ENST00000642007 4893 ntBASIC17.65■□□□□ 0.42
ATP2B3Q16720 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
ATP2B3Q16720 AC015802.1-201ENST00000588104 1449 ntBASIC17.64■□□□□ 0.42
ATP2B3Q16720 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
ATP2B3Q16720 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.64■□□□□ 0.42
ATP2B3Q16720 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.64■□□□□ 0.42
ATP2B3Q16720 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.64■□□□□ 0.41
ATP2B3Q16720 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2B3Q16720 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2B3Q16720 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2B3Q16720 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2B3Q16720 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2B3Q16720 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2B3Q16720 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
ATP2B3Q16720 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC17.64■□□□□ 0.41
ATP2B3Q16720 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC17.64■□□□□ 0.41
ATP2B3Q16720 CD164-210ENST00000512821 964 ntTSL 2 BASIC17.64■□□□□ 0.41
ATP2B3Q16720 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.64■□□□□ 0.41
ATP2B3Q16720 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.64■□□□□ 0.41
ATP2B3Q16720 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2B3Q16720 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.64■□□□□ 0.41
ATP2B3Q16720 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.64■□□□□ 0.41
ATP2B3Q16720 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2B3Q16720 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.64■□□□□ 0.41
ATP2B3Q16720 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.64■□□□□ 0.41
ATP2B3Q16720 PKD1P5-201ENST00000532415 10291 ntBASIC17.64■□□□□ 0.41
ATP2B3Q16720 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
ATP2B3Q16720 KRT18P9-201ENST00000604826 1300 ntBASIC17.64■□□□□ 0.41
ATP2B3Q16720 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2B3Q16720 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
ATP2B3Q16720 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2B3Q16720 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2B3Q16720 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.64■□□□□ 0.41
ATP2B3Q16720 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2B3Q16720 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2B3Q16720 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ATP2B3Q16720 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2B3Q16720 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2B3Q16720 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP2B3Q16720 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.63■□□□□ 0.41
ATP2B3Q16720 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
ATP2B3Q16720 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2B3Q16720 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2B3Q16720 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2B3Q16720 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2B3Q16720 KRT17P5-201ENST00000332088 839 ntBASIC17.63■□□□□ 0.41
ATP2B3Q16720 AL583805.1-201ENST00000391389 531 ntBASIC17.63■□□□□ 0.41
ATP2B3Q16720 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC17.63■□□□□ 0.41
ATP2B3Q16720 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP2B3Q16720 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.63■□□□□ 0.41
ATP2B3Q16720 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms