Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC19.44■□□□□ 0.7
CGNL1Q0VF96 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC19.44■□□□□ 0.7
CGNL1Q0VF96 AC067931.2-201ENST00000623655 2003 ntBASIC19.44■□□□□ 0.7
CGNL1Q0VF96 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CGNL1Q0VF96 SHMT1P1-201ENST00000419974 1312 ntBASIC19.44■□□□□ 0.7
CGNL1Q0VF96 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CGNL1Q0VF96 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 SNX18-202ENST00000343017 3140 ntBASIC19.43■□□□□ 0.7
CGNL1Q0VF96 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 AC103592.1-201ENST00000394513 664 ntBASIC19.43■□□□□ 0.7
CGNL1Q0VF96 RPL7P35-201ENST00000446943 740 ntBASIC19.43■□□□□ 0.7
CGNL1Q0VF96 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 KRT18P15-201ENST00000458108 1291 ntBASIC19.43■□□□□ 0.7
CGNL1Q0VF96 CHCHD2P9-201ENST00000461726 456 ntBASIC19.43■□□□□ 0.7
CGNL1Q0VF96 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 AC242376.2-201ENST00000619355 883 ntBASIC19.43■□□□□ 0.7
CGNL1Q0VF96 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CGNL1Q0VF96 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 SOD2-202ENST00000367054 815 ntTSL 2 BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 AP000356.3-201ENST00000382243 753 ntBASIC19.42■□□□□ 0.7
CGNL1Q0VF96 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 AL512430.1-201ENST00000392575 860 ntBASIC19.42■□□□□ 0.7
CGNL1Q0VF96 HPGD-203ENST00000422112 805 ntTSL 2 BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 NDUFB10P1-201ENST00000567319 521 ntBASIC19.42■□□□□ 0.7
CGNL1Q0VF96 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 AC015656.1-201ENST00000624209 3578 ntBASIC19.42■□□□□ 0.7
CGNL1Q0VF96 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CGNL1Q0VF96 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CGNL1Q0VF96 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CGNL1Q0VF96 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CGNL1Q0VF96 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC19.41■□□□□ 0.7
CGNL1Q0VF96 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC19.41■□□□□ 0.7
CGNL1Q0VF96 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CGNL1Q0VF96 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CGNL1Q0VF96 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms