Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC42P60953 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.27□□□□□ -0.29
CDC42P60953 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
CDC42P60953 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.27□□□□□ -0.29
CDC42P60953 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CDC42P60953 AL590440.2-201ENST00000641973 1595 ntBASIC13.27□□□□□ -0.29
CDC42P60953 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDC42P60953 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.29
CDC42P60953 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CDC42P60953 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC42P60953 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC42P60953 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.27□□□□□ -0.29
CDC42P60953 AL022313.4-201ENST00000562756 2046 ntBASIC13.27□□□□□ -0.29
CDC42P60953 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC42P60953 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC42P60953 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CDC42P60953 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42P60953 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC13.26□□□□□ -0.29
CDC42P60953 PCDHB18P-202ENST00000526308 3197 ntBASIC13.26□□□□□ -0.29
CDC42P60953 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42P60953 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CDC42P60953 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CDC42P60953 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42P60953 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42P60953 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42P60953 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CDC42P60953 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42P60953 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42P60953 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CDC42P60953 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.26□□□□□ -0.29
CDC42P60953 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42P60953 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CDC42P60953 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42P60953 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CDC42P60953 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42P60953 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CDC42P60953 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42P60953 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.26□□□□□ -0.29
CDC42P60953 RN7SKP230-201ENST00000365642 335 ntBASIC13.26□□□□□ -0.29
CDC42P60953 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.26□□□□□ -0.29
CDC42P60953 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42P60953 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.26□□□□□ -0.29
CDC42P60953 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42P60953 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42P60953 C1QBPP1-201ENST00000400117 770 ntBASIC13.26□□□□□ -0.29
CDC42P60953 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42P60953 AC092580.3-201ENST00000430932 139 ntBASIC13.26□□□□□ -0.29
CDC42P60953 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.26□□□□□ -0.29
CDC42P60953 AC009477.1-201ENST00000452936 217 ntBASIC13.26□□□□□ -0.29
CDC42P60953 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.26□□□□□ -0.29
CDC42P60953 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.26□□□□□ -0.29
CDC42P60953 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42P60953 AC135586.1-201ENST00000539323 574 ntBASIC13.26□□□□□ -0.29
CDC42P60953 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.26□□□□□ -0.29
CDC42P60953 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.26□□□□□ -0.29
CDC42P60953 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.26□□□□□ -0.29
CDC42P60953 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.26□□□□□ -0.29
CDC42P60953 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42P60953 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.26□□□□□ -0.29
CDC42P60953 AL390955.2-201ENST00000603032 514 ntBASIC13.26□□□□□ -0.29
CDC42P60953 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CDC42P60953 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.26□□□□□ -0.29
CDC42P60953 BAP1-211ENST00000615113 489 ntBASIC13.26□□□□□ -0.29
CDC42P60953 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.26□□□□□ -0.29
CDC42P60953 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CDC42P60953 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.26□□□□□ -0.29
CDC42P60953 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42P60953 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
CDC42P60953 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42P60953 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42P60953 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CDC42P60953 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.25□□□□□ -0.29
CDC42P60953 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
CDC42P60953 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CDC42P60953 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC42P60953 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CDC42P60953 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC42P60953 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CDC42P60953 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC42P60953 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.25□□□□□ -0.29
CDC42P60953 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC42P60953 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC42P60953 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 MKRN5P-201ENST00000445263 1467 ntBASIC13.25□□□□□ -0.29
CDC42P60953 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CDC42P60953 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC42P60953 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.25□□□□□ -0.29
CDC42P60953 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC42P60953 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms