Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CDH12P55289 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CDH12P55289 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CDH12P55289 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CDH12P55289 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.52□□□□□ -0.24
CDH12P55289 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CDH12P55289 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CDH12P55289 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CDH12P55289 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CDH12P55289 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CDH12P55289 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDH12P55289 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDH12P55289 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDH12P55289 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDH12P55289 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDH12P55289 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.52□□□□□ -0.25
CDH12P55289 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDH12P55289 AC068587.3-201ENST00000526613 355 ntBASIC13.52□□□□□ -0.25
CDH12P55289 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CDH12P55289 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.52□□□□□ -0.25
CDH12P55289 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.52□□□□□ -0.25
CDH12P55289 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.52□□□□□ -0.25
CDH12P55289 AL355385.1-201ENST00000606123 409 ntBASIC13.52□□□□□ -0.25
CDH12P55289 FKBP4P6-201ENST00000457486 1332 ntBASIC13.52□□□□□ -0.25
CDH12P55289 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CDH12P55289 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.52□□□□□ -0.25
CDH12P55289 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDH12P55289 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDH12P55289 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CDH12P55289 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CDH12P55289 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDH12P55289 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDH12P55289 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDH12P55289 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDH12P55289 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CDH12P55289 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.52□□□□□ -0.25
CDH12P55289 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CDH12P55289 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CDH12P55289 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CDH12P55289 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.51□□□□□ -0.25
CDH12P55289 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.51□□□□□ -0.25
CDH12P55289 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CDH12P55289 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CDH12P55289 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.51□□□□□ -0.25
CDH12P55289 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.51□□□□□ -0.25
CDH12P55289 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CDH12P55289 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CDH12P55289 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CDH12P55289 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CDH12P55289 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 AC004945.1-201ENST00000416738 983 ntBASIC13.51□□□□□ -0.25
CDH12P55289 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.51□□□□□ -0.25
CDH12P55289 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 CRB3P1-201ENST00000449338 276 ntBASIC13.51□□□□□ -0.25
CDH12P55289 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 FTLP10-202ENST00000505798 471 ntBASIC13.51□□□□□ -0.25
CDH12P55289 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CDH12P55289 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.51□□□□□ -0.25
CDH12P55289 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.51□□□□□ -0.25
CDH12P55289 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.51□□□□□ -0.25
CDH12P55289 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.51□□□□□ -0.25
CDH12P55289 RN7SL48P-201ENST00000579283 293 ntBASIC13.51□□□□□ -0.25
CDH12P55289 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.51□□□□□ -0.25
CDH12P55289 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.51□□□□□ -0.25
CDH12P55289 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.51□□□□□ -0.25
CDH12P55289 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CDH12P55289 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 LINC02486-201ENST00000604157 3000 ntBASIC13.51□□□□□ -0.25
CDH12P55289 AC092053.3-201ENST00000641308 4975 ntBASIC13.51□□□□□ -0.25
CDH12P55289 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.51□□□□□ -0.25
CDH12P55289 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CDH12P55289 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.51□□□□□ -0.25
CDH12P55289 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
CDH12P55289 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CDH12P55289 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDH12P55289 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.51□□□□□ -0.25
CDH12P55289 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDH12P55289 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms