Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.25□□□□□ -0.13
CDKN2DP55273 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDKN2DP55273 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.25□□□□□ -0.13
CDKN2DP55273 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDKN2DP55273 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
CDKN2DP55273 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.25□□□□□ -0.13
CDKN2DP55273 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CDKN2DP55273 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CDKN2DP55273 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CDKN2DP55273 AC079781.5-202ENST00000641784 3743 ntBASIC14.24□□□□□ -0.13
CDKN2DP55273 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.24□□□□□ -0.13
CDKN2DP55273 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CDKN2DP55273 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.24□□□□□ -0.13
CDKN2DP55273 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 AL365181.3-201ENST00000605886 3222 ntBASIC14.24□□□□□ -0.13
CDKN2DP55273 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.24□□□□□ -0.13
CDKN2DP55273 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 AC012441.2-201ENST00000444843 739 ntBASIC14.24□□□□□ -0.13
CDKN2DP55273 AC022210.1-201ENST00000449856 793 ntBASIC14.24□□□□□ -0.13
CDKN2DP55273 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.24□□□□□ -0.13
CDKN2DP55273 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.24□□□□□ -0.13
CDKN2DP55273 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 AC006122.1-201ENST00000493323 440 ntBASIC14.24□□□□□ -0.13
CDKN2DP55273 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.24□□□□□ -0.13
CDKN2DP55273 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.24□□□□□ -0.13
CDKN2DP55273 DUX4L45-201ENST00000566406 1057 ntBASIC14.24□□□□□ -0.13
CDKN2DP55273 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.24□□□□□ -0.13
CDKN2DP55273 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CDKN2DP55273 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.24□□□□□ -0.13
CDKN2DP55273 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.24□□□□□ -0.13
CDKN2DP55273 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
CDKN2DP55273 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.24□□□□□ -0.13
CDKN2DP55273 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CDKN2DP55273 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDKN2DP55273 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.24□□□□□ -0.13
CDKN2DP55273 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
CDKN2DP55273 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.23□□□□□ -0.13
CDKN2DP55273 CCT8L1P-201ENST00000465400 1674 ntBASIC14.23□□□□□ -0.13
CDKN2DP55273 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.23□□□□□ -0.13
CDKN2DP55273 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDKN2DP55273 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDKN2DP55273 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.23□□□□□ -0.13
CDKN2DP55273 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDKN2DP55273 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.23□□□□□ -0.13
CDKN2DP55273 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDKN2DP55273 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
CDKN2DP55273 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDKN2DP55273 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDKN2DP55273 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDKN2DP55273 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CDKN2DP55273 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CDKN2DP55273 YBX1P6-201ENST00000442962 1002 ntBASIC14.23□□□□□ -0.13
CDKN2DP55273 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.23□□□□□ -0.13
CDKN2DP55273 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.23□□□□□ -0.13
CDKN2DP55273 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.23□□□□□ -0.13
CDKN2DP55273 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CDKN2DP55273 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.23□□□□□ -0.13
CDKN2DP55273 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.23□□□□□ -0.13
CDKN2DP55273 MIR4259-201ENST00000584466 101 ntBASIC14.23□□□□□ -0.13
CDKN2DP55273 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.23□□□□□ -0.13
CDKN2DP55273 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.23□□□□□ -0.13
CDKN2DP55273 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.23□□□□□ -0.13
CDKN2DP55273 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDKN2DP55273 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CDKN2DP55273 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDKN2DP55273 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDKN2DP55273 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CDKN2DP55273 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDKN2DP55273 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.23□□□□□ -0.13
CDKN2DP55273 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDKN2DP55273 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDKN2DP55273 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDKN2DP55273 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CDKN2DP55273 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDKN2DP55273 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDKN2DP55273 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDKN2DP55273 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDKN2DP55273 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDKN2DP55273 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.22□□□□□ -0.13
CDKN2DP55273 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms