Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
PDX1P52945 AC005089.1-201ENST00000619486 2241 ntBASIC14.03□□□□□ -0.16
PDX1P52945 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 AC097359.2-201ENST00000604992 2389 ntBASIC14.03□□□□□ -0.16
PDX1P52945 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 MIR557-201ENST00000385239 98 ntBASIC14.03□□□□□ -0.16
PDX1P52945 RPS9P1-201ENST00000419943 583 ntBASIC14.03□□□□□ -0.16
PDX1P52945 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.03□□□□□ -0.16
PDX1P52945 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.03□□□□□ -0.16
PDX1P52945 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.03□□□□□ -0.16
PDX1P52945 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.03□□□□□ -0.16
PDX1P52945 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.03□□□□□ -0.16
PDX1P52945 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.03□□□□□ -0.16
PDX1P52945 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.03□□□□□ -0.16
PDX1P52945 AC005632.3-201ENST00000605544 308 ntBASIC14.03□□□□□ -0.16
PDX1P52945 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.03□□□□□ -0.16
PDX1P52945 LINC01783-202ENST00000614408 828 ntBASIC14.03□□□□□ -0.16
PDX1P52945 BX284668.2-205ENST00000619677 828 ntBASIC14.03□□□□□ -0.16
PDX1P52945 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.03□□□□□ -0.16
PDX1P52945 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.03□□□□□ -0.16
PDX1P52945 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PDX1P52945 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.03□□□□□ -0.16
PDX1P52945 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
PDX1P52945 AC113367.3-201ENST00000508316 1912 ntBASIC14.03□□□□□ -0.16
PDX1P52945 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.03□□□□□ -0.16
PDX1P52945 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
PDX1P52945 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PDX1P52945 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
PDX1P52945 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.03□□□□□ -0.16
PDX1P52945 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDX1P52945 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDX1P52945 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
PDX1P52945 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
PDX1P52945 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDX1P52945 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDX1P52945 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDX1P52945 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDX1P52945 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDX1P52945 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDX1P52945 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.02□□□□□ -0.16
PDX1P52945 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.02□□□□□ -0.16
PDX1P52945 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PDX1P52945 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
PDX1P52945 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PDX1P52945 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDX1P52945 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDX1P52945 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PDX1P52945 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDX1P52945 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDX1P52945 AL590440.2-201ENST00000641973 1595 ntBASIC14.02□□□□□ -0.16
PDX1P52945 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PDX1P52945 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PDX1P52945 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC14.02□□□□□ -0.17
PDX1P52945 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.02□□□□□ -0.17
PDX1P52945 AL512430.1-201ENST00000392575 860 ntBASIC14.02□□□□□ -0.17
PDX1P52945 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.02□□□□□ -0.17
PDX1P52945 AL627389.1-201ENST00000413508 1182 ntBASIC14.02□□□□□ -0.17
PDX1P52945 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.02□□□□□ -0.17
PDX1P52945 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.02□□□□□ -0.17
PDX1P52945 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PDX1P52945 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC14.02□□□□□ -0.17
PDX1P52945 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC14.02□□□□□ -0.17
PDX1P52945 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC14.02□□□□□ -0.17
PDX1P52945 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PDX1P52945 AP002803.1-201ENST00000528836 498 ntBASIC14.02□□□□□ -0.17
PDX1P52945 PGAM1P5-201ENST00000548011 764 ntBASIC14.02□□□□□ -0.17
PDX1P52945 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.02□□□□□ -0.17
PDX1P52945 MIR3188-201ENST00000583494 85 ntBASIC14.02□□□□□ -0.17
PDX1P52945 RPL17P45-201ENST00000586289 509 ntBASIC14.02□□□□□ -0.17
PDX1P52945 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PDX1P52945 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.02□□□□□ -0.17
PDX1P52945 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.02□□□□□ -0.17
PDX1P52945 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDX1P52945 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDX1P52945 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDX1P52945 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
PDX1P52945 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDX1P52945 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PDX1P52945 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDX1P52945 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms