Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-1P43699 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC11.89□□□□□ -0.51
NKX2-1P43699 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC11.89□□□□□ -0.51
NKX2-1P43699 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-1P43699 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
NKX2-1P43699 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
NKX2-1P43699 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.89□□□□□ -0.51
NKX2-1P43699 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-1P43699 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC11.89□□□□□ -0.51
NKX2-1P43699 C2-206ENST00000442278 2434 ntTSL 2 BASIC11.89□□□□□ -0.51
NKX2-1P43699 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-1P43699 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-1P43699 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-1P43699 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
NKX2-1P43699 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.89□□□□□ -0.51
NKX2-1P43699 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-1P43699 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-1P43699 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC11.89□□□□□ -0.51
NKX2-1P43699 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-1P43699 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC11.89□□□□□ -0.51
NKX2-1P43699 MKRN5P-201ENST00000445263 1467 ntBASIC11.89□□□□□ -0.51
NKX2-1P43699 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX2-1P43699 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
NKX2-1P43699 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 AC087499.5-201ENST00000452760 1342 ntBASIC11.88□□□□□ -0.51
NKX2-1P43699 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
NKX2-1P43699 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
NKX2-1P43699 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 TNRC18P1-201ENST00000502875 3650 ntBASIC11.88□□□□□ -0.51
NKX2-1P43699 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC11.88□□□□□ -0.51
NKX2-1P43699 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
NKX2-1P43699 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
NKX2-1P43699 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
NKX2-1P43699 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC11.88□□□□□ -0.51
NKX2-1P43699 DNAJB3-202ENST00000449667 1266 ntBASIC11.88□□□□□ -0.51
NKX2-1P43699 GCOM2-201ENST00000509133 1104 ntBASIC11.88□□□□□ -0.51
NKX2-1P43699 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC11.88□□□□□ -0.51
NKX2-1P43699 ZNF890P-202ENST00000530367 1156 ntBASIC11.88□□□□□ -0.51
NKX2-1P43699 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC11.88□□□□□ -0.51
NKX2-1P43699 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.88□□□□□ -0.51
NKX2-1P43699 AC069262.1-201ENST00000539058 672 ntBASIC11.88□□□□□ -0.51
NKX2-1P43699 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 AC138761.1-201ENST00000584393 385 ntBASIC11.88□□□□□ -0.51
NKX2-1P43699 WDR88-203ENST00000592765 651 ntTSL 5 BASIC11.88□□□□□ -0.51
NKX2-1P43699 KLK3-207ENST00000595952 969 ntTSL 3 BASIC11.88□□□□□ -0.51
NKX2-1P43699 AL391069.4-201ENST00000609583 481 ntBASIC11.88□□□□□ -0.51
NKX2-1P43699 TEX48-202ENST00000612244 662 ntTSL 3 BASIC11.88□□□□□ -0.51
NKX2-1P43699 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC11.88□□□□□ -0.51
NKX2-1P43699 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.88□□□□□ -0.51
NKX2-1P43699 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
NKX2-1P43699 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
NKX2-1P43699 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
NKX2-1P43699 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC11.88□□□□□ -0.51
NKX2-1P43699 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC11.88□□□□□ -0.51
NKX2-1P43699 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC11.88□□□□□ -0.51
NKX2-1P43699 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC11.88□□□□□ -0.51
NKX2-1P43699 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX2-1P43699 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
NKX2-1P43699 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
NKX2-1P43699 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
NKX2-1P43699 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
NKX2-1P43699 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
NKX2-1P43699 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC11.87□□□□□ -0.51
NKX2-1P43699 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX2-1P43699 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms