Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HTTP42858 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
HTTP42858 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC15.57■□□□□ 0.08
HTTP42858 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HTTP42858 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HTTP42858 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HTTP42858 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
HTTP42858 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HTTP42858 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
HTTP42858 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC15.57■□□□□ 0.08
HTTP42858 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HTTP42858 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC15.57■□□□□ 0.08
HTTP42858 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HTTP42858 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC15.57■□□□□ 0.08
HTTP42858 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HTTP42858 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.57■□□□□ 0.08
HTTP42858 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HTTP42858 AP001267.2-201ENST00000532619 2086 ntBASIC15.57■□□□□ 0.08
HTTP42858 AC073347.1-201ENST00000421633 2643 ntBASIC15.57■□□□□ 0.08
HTTP42858 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
HTTP42858 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC15.57■□□□□ 0.08
HTTP42858 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
HTTP42858 PTN-202ENST00000393083 1599 ntTSL 5 BASIC15.57■□□□□ 0.08
HTTP42858 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HTTP42858 AC008620.2-201ENST00000510294 1569 ntBASIC15.57■□□□□ 0.08
HTTP42858 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC15.57■□□□□ 0.08
HTTP42858 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
HTTP42858 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HTTP42858 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC15.57■□□□□ 0.08
HTTP42858 RBM14-205ENST00000443702 732 ntTSL 3 BASIC15.57■□□□□ 0.08
HTTP42858 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
HTTP42858 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC15.57■□□□□ 0.08
HTTP42858 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC15.57■□□□□ 0.08
HTTP42858 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC15.57■□□□□ 0.08
HTTP42858 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HTTP42858 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
HTTP42858 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
HTTP42858 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.56■□□□□ 0.08
HTTP42858 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HTTP42858 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.56■□□□□ 0.08
HTTP42858 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HTTP42858 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HTTP42858 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC15.56■□□□□ 0.08
HTTP42858 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HTTP42858 CDIPT-AS1-203ENST00000638164 713 ntBASIC15.56■□□□□ 0.08
HTTP42858 AGAP7P-201ENST00000582299 2062 ntBASIC15.56■□□□□ 0.08
HTTP42858 AGAP14-201ENST00000624701 2060 ntBASIC15.56■□□□□ 0.08
HTTP42858 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.56■□□□□ 0.08
HTTP42858 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HTTP42858 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HTTP42858 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HTTP42858 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HTTP42858 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HTTP42858 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.56■□□□□ 0.08
HTTP42858 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HTTP42858 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HTTP42858 AL121994.1-201ENST00000413189 402 ntBASIC15.56■□□□□ 0.08
HTTP42858 AC104117.4-201ENST00000521486 847 ntBASIC15.56■□□□□ 0.08
HTTP42858 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC15.56■□□□□ 0.08
HTTP42858 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC15.56■□□□□ 0.08
HTTP42858 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC15.56■□□□□ 0.08
HTTP42858 AC089987.1-201ENST00000551654 2209 ntBASIC15.56■□□□□ 0.08
HTTP42858 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HTTP42858 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HTTP42858 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HTTP42858 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HTTP42858 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
HTTP42858 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.56■□□□□ 0.08
HTTP42858 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HTTP42858 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HTTP42858 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HTTP42858 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.55■□□□□ 0.08
HTTP42858 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTTP42858 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTTP42858 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC15.55■□□□□ 0.08
HTTP42858 AC005011.1-201ENST00000455206 210 ntBASIC15.55■□□□□ 0.08
HTTP42858 AC005332.2-201ENST00000590010 930 ntBASIC15.55■□□□□ 0.08
HTTP42858 AL137028.2-201ENST00000614601 256 ntBASIC15.55■□□□□ 0.08
HTTP42858 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC15.55■□□□□ 0.08
HTTP42858 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC15.55■□□□□ 0.08
HTTP42858 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC15.55■□□□□ 0.08
HTTP42858 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HTTP42858 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTTP42858 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.55■□□□□ 0.08
HTTP42858 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTTP42858 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HTTP42858 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTTP42858 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HTTP42858 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HTTP42858 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC15.55■□□□□ 0.08
HTTP42858 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTTP42858 GYG1-209ENST00000483267 801 ntTSL 2 BASIC15.55■□□□□ 0.08
HTTP42858 AC239600.1-201ENST00000603201 462 ntBASIC15.55■□□□□ 0.08
HTTP42858 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC15.55■□□□□ 0.08
HTTP42858 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC15.55■□□□□ 0.08
HTTP42858 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTTP42858 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTTP42858 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTTP42858 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC15.55■□□□□ 0.08
HTTP42858 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms