Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC16.53■□□□□ 0.24
KRT2P35908 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT2P35908 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT2P35908 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT2P35908 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT2P35908 AC005840.4-201ENST00000541242 2494 ntBASIC16.53■□□□□ 0.24
KRT2P35908 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT2P35908 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.53■□□□□ 0.24
KRT2P35908 DPM3-202ENST00000368399 517 ntBASIC16.53■□□□□ 0.24
KRT2P35908 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.53■□□□□ 0.24
KRT2P35908 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
KRT2P35908 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.53■□□□□ 0.24
KRT2P35908 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT2P35908 AC104306.2-201ENST00000451877 341 ntBASIC16.53■□□□□ 0.24
KRT2P35908 AC104073.2-201ENST00000453737 312 ntBASIC16.53■□□□□ 0.24
KRT2P35908 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT2P35908 SERPINA13P-202ENST00000478994 924 ntBASIC16.53■□□□□ 0.24
KRT2P35908 AC106794.1-201ENST00000506935 792 ntBASIC16.53■□□□□ 0.24
KRT2P35908 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
KRT2P35908 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.53■□□□□ 0.24
KRT2P35908 AC140658.4-201ENST00000561990 352 ntBASIC16.53■□□□□ 0.24
KRT2P35908 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.53■□□□□ 0.24
KRT2P35908 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT2P35908 MIR6752-201ENST00000618442 71 ntBASIC16.53■□□□□ 0.24
KRT2P35908 AL136295.7-201ENST00000619226 1200 ntBASIC16.53■□□□□ 0.24
KRT2P35908 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT2P35908 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT2P35908 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT2P35908 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
KRT2P35908 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
KRT2P35908 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT2P35908 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT2P35908 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT2P35908 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT2P35908 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT2P35908 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT2P35908 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT2P35908 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.53■□□□□ 0.24
KRT2P35908 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT2P35908 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT2P35908 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT2P35908 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT2P35908 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT2P35908 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT2P35908 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT2P35908 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.52■□□□□ 0.24
KRT2P35908 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KRT2P35908 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
KRT2P35908 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT2P35908 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT2P35908 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.52■□□□□ 0.24
KRT2P35908 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
KRT2P35908 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KRT2P35908 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.52■□□□□ 0.24
KRT2P35908 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT2P35908 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.52■□□□□ 0.24
KRT2P35908 AC126915.1-201ENST00000522847 1038 ntBASIC16.52■□□□□ 0.24
KRT2P35908 SNORD3B-2-202ENST00000571722 791 ntBASIC16.52■□□□□ 0.24
KRT2P35908 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT2P35908 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.52■□□□□ 0.24
KRT2P35908 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
KRT2P35908 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KRT2P35908 AL008638.5-201ENST00000623814 1298 ntBASIC16.52■□□□□ 0.24
KRT2P35908 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT2P35908 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT2P35908 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT2P35908 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT2P35908 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
KRT2P35908 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
KRT2P35908 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT2P35908 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
KRT2P35908 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
KRT2P35908 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
KRT2P35908 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT2P35908 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT2P35908 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT2P35908 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT2P35908 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT2P35908 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT2P35908 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT2P35908 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT2P35908 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT2P35908 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT2P35908 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT2P35908 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT2P35908 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT2P35908 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
KRT2P35908 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC16.51■□□□□ 0.23
KRT2P35908 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
KRT2P35908 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT2P35908 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT2P35908 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.51■□□□□ 0.23
KRT2P35908 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
KRT2P35908 AC078875.1-201ENST00000431907 724 ntBASIC16.51■□□□□ 0.23
KRT2P35908 AC092580.1-201ENST00000433998 658 ntBASIC16.51■□□□□ 0.23
KRT2P35908 PFN1P12-201ENST00000455938 534 ntBASIC16.51■□□□□ 0.23
KRT2P35908 AC005740.2-201ENST00000511085 419 ntBASIC16.51■□□□□ 0.23
KRT2P35908 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT2P35908 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT2P35908 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms