Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN1P35523 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN1P35523 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.5■□□□□ 0.23
CLCN1P35523 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.5■□□□□ 0.23
CLCN1P35523 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN1P35523 AC011840.2-201ENST00000563063 1520 ntBASIC16.5■□□□□ 0.23
CLCN1P35523 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC16.5■□□□□ 0.23
CLCN1P35523 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.49■□□□□ 0.23
CLCN1P35523 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC16.49■□□□□ 0.23
CLCN1P35523 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CLCN1P35523 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.49■□□□□ 0.23
CLCN1P35523 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CLCN1P35523 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 HNRNPMP1-201ENST00000560685 1768 ntBASIC16.49■□□□□ 0.23
CLCN1P35523 HSPA8P5-201ENST00000456928 2069 ntBASIC16.49■□□□□ 0.23
CLCN1P35523 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC16.49■□□□□ 0.23
CLCN1P35523 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 AC003958.1-201ENST00000435883 421 ntBASIC16.49■□□□□ 0.23
CLCN1P35523 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.49■□□□□ 0.23
CLCN1P35523 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.49■□□□□ 0.23
CLCN1P35523 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.49■□□□□ 0.23
CLCN1P35523 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.49■□□□□ 0.23
CLCN1P35523 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.49■□□□□ 0.23
CLCN1P35523 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.49■□□□□ 0.23
CLCN1P35523 RARRES2P5-201ENST00000564013 466 ntBASIC16.49■□□□□ 0.23
CLCN1P35523 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CLCN1P35523 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CLCN1P35523 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC16.49■□□□□ 0.23
CLCN1P35523 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC16.49■□□□□ 0.23
CLCN1P35523 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CLCN1P35523 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC16.49■□□□□ 0.23
CLCN1P35523 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CLCN1P35523 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCN1P35523 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC16.48■□□□□ 0.23
CLCN1P35523 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.48■□□□□ 0.23
CLCN1P35523 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CLCN1P35523 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CLCN1P35523 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 LINC00638-201ENST00000555578 2518 ntBASIC16.48■□□□□ 0.23
CLCN1P35523 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CLCN1P35523 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC16.48■□□□□ 0.23
CLCN1P35523 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CLCN1P35523 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
CLCN1P35523 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.48■□□□□ 0.23
CLCN1P35523 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CLCN1P35523 GNAQP1-201ENST00000444815 1067 ntBASIC16.48■□□□□ 0.23
CLCN1P35523 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CLCN1P35523 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.48■□□□□ 0.23
CLCN1P35523 DOC2GP-202ENST00000514950 1163 ntBASIC16.48■□□□□ 0.23
CLCN1P35523 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.48■□□□□ 0.23
CLCN1P35523 AC027796.2-201ENST00000575326 344 ntBASIC16.48■□□□□ 0.23
CLCN1P35523 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.48■□□□□ 0.23
CLCN1P35523 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC16.48■□□□□ 0.23
CLCN1P35523 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CLCN1P35523 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CLCN1P35523 AC124319.4-201ENST00000622931 2161 ntBASIC16.48■□□□□ 0.23
CLCN1P35523 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CLCN1P35523 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC16.48■□□□□ 0.23
CLCN1P35523 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms