Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC19■□□□□ 0.63
USP6P35125 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP6P35125 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
USP6P35125 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC19■□□□□ 0.63
USP6P35125 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
USP6P35125 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
USP6P35125 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP6P35125 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
USP6P35125 USP39-207ENST00000450066 2086 ntTSL 2 BASIC19■□□□□ 0.63
USP6P35125 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
USP6P35125 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC19■□□□□ 0.63
USP6P35125 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP6P35125 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
USP6P35125 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP6P35125 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
USP6P35125 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
USP6P35125 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
USP6P35125 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP6P35125 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
USP6P35125 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
USP6P35125 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP6P35125 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP6P35125 AP000244.1-201ENST00000424582 201 ntBASIC19■□□□□ 0.63
USP6P35125 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC19■□□□□ 0.63
USP6P35125 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC19■□□□□ 0.63
USP6P35125 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC19■□□□□ 0.63
USP6P35125 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
USP6P35125 ESR1-214ENST00000638569 132 ntTSL 5 BASIC19■□□□□ 0.63
USP6P35125 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
USP6P35125 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP6P35125 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP6P35125 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.99■□□□□ 0.63
USP6P35125 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP6P35125 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
USP6P35125 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP6P35125 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC18.99■□□□□ 0.63
USP6P35125 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
USP6P35125 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC18.99■□□□□ 0.63
USP6P35125 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP6P35125 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC18.99■□□□□ 0.63
USP6P35125 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.99■□□□□ 0.63
USP6P35125 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
USP6P35125 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC18.99■□□□□ 0.63
USP6P35125 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP6P35125 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP6P35125 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP6P35125 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.99■□□□□ 0.63
USP6P35125 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP6P35125 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP6P35125 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP6P35125 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.99■□□□□ 0.63
USP6P35125 NALT1-202ENST00000450304 437 ntTSL 3 BASIC18.99■□□□□ 0.63
USP6P35125 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC18.99■□□□□ 0.63
USP6P35125 RN7SL288P-201ENST00000490496 291 ntBASIC18.99■□□□□ 0.63
USP6P35125 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC18.99■□□□□ 0.63
USP6P35125 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP6P35125 MBP-238ENST00000580402 915 ntTSL 5 BASIC18.99■□□□□ 0.63
USP6P35125 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC18.99■□□□□ 0.63
USP6P35125 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC18.99■□□□□ 0.63
USP6P35125 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP6P35125 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP6P35125 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP6P35125 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP6P35125 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
USP6P35125 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP6P35125 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.98■□□□□ 0.63
USP6P35125 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP6P35125 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP6P35125 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP6P35125 AC138932.1-201ENST00000534164 6830 ntBASIC18.98■□□□□ 0.63
USP6P35125 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP6P35125 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP6P35125 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
USP6P35125 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP6P35125 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP6P35125 AC140479.7-201ENST00000636301 2332 ntBASIC18.98■□□□□ 0.63
USP6P35125 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP6P35125 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP6P35125 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC18.98■□□□□ 0.63
USP6P35125 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP6P35125 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP6P35125 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC18.98■□□□□ 0.63
USP6P35125 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC18.98■□□□□ 0.63
USP6P35125 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
USP6P35125 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
USP6P35125 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC18.98■□□□□ 0.63
USP6P35125 ACTBP7-201ENST00000418351 1124 ntBASIC18.98■□□□□ 0.63
USP6P35125 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC18.98■□□□□ 0.63
USP6P35125 NME6-208ENST00000435684 599 ntTSL 2 BASIC18.98■□□□□ 0.63
USP6P35125 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC18.98■□□□□ 0.63
USP6P35125 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP6P35125 GULOP-201ENST00000454030 748 ntBASIC18.98■□□□□ 0.63
USP6P35125 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC18.98■□□□□ 0.63
USP6P35125 MIR4326-201ENST00000582203 59 ntBASIC18.98■□□□□ 0.63
USP6P35125 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC18.98■□□□□ 0.63
USP6P35125 TYMSP2-201ENST00000589501 424 ntBASIC18.98■□□□□ 0.63
USP6P35125 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC18.98■□□□□ 0.63
USP6P35125 MIR8071-1-201ENST00000616769 65 ntBASIC18.98■□□□□ 0.63
USP6P35125 MIR8071-2-201ENST00000616772 65 ntBASIC18.98■□□□□ 0.63
USP6P35125 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms