Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMLP26374 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMLP26374 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.34■□□□□ 0.37
CHMLP26374 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.34■□□□□ 0.37
CHMLP26374 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.34■□□□□ 0.37
CHMLP26374 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
CHMLP26374 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.34■□□□□ 0.37
CHMLP26374 GOLGA8IP-202ENST00000611635 2100 ntBASIC17.34■□□□□ 0.37
CHMLP26374 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMLP26374 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMLP26374 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMLP26374 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMLP26374 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMLP26374 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMLP26374 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMLP26374 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMLP26374 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC17.33■□□□□ 0.37
CHMLP26374 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC17.33■□□□□ 0.37
CHMLP26374 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMLP26374 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CHMLP26374 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMLP26374 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CHMLP26374 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC17.33■□□□□ 0.37
CHMLP26374 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CHMLP26374 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMLP26374 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMLP26374 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CHMLP26374 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMLP26374 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CHMLP26374 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CHMLP26374 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMLP26374 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CHMLP26374 AC104073.2-201ENST00000453737 312 ntBASIC17.33■□□□□ 0.36
CHMLP26374 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CHMLP26374 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.33■□□□□ 0.36
CHMLP26374 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
CHMLP26374 AC140658.4-201ENST00000561990 352 ntBASIC17.33■□□□□ 0.36
CHMLP26374 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.33■□□□□ 0.36
CHMLP26374 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.33■□□□□ 0.36
CHMLP26374 AC104982.3-201ENST00000581995 514 ntBASIC17.33■□□□□ 0.36
CHMLP26374 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.33■□□□□ 0.36
CHMLP26374 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.33■□□□□ 0.36
CHMLP26374 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CHMLP26374 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC17.33■□□□□ 0.36
CHMLP26374 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMLP26374 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHMLP26374 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CHMLP26374 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CHMLP26374 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMLP26374 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHMLP26374 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CHMLP26374 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
CHMLP26374 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CHMLP26374 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHMLP26374 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMLP26374 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMLP26374 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMLP26374 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC17.32■□□□□ 0.36
CHMLP26374 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMLP26374 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHMLP26374 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMLP26374 LINC00115-201ENST00000473798 1317 ntBASIC17.32■□□□□ 0.36
CHMLP26374 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMLP26374 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHMLP26374 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.32■□□□□ 0.36
CHMLP26374 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHMLP26374 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMLP26374 POM121L10P-201ENST00000436994 1285 ntBASIC17.32■□□□□ 0.36
CHMLP26374 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMLP26374 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMLP26374 MAX-218ENST00000557746 571 ntTSL 4 BASIC17.32■□□□□ 0.36
CHMLP26374 SNORD3B-2-202ENST00000571722 791 ntBASIC17.32■□□□□ 0.36
CHMLP26374 AC007663.3-201ENST00000609632 465 ntBASIC17.32■□□□□ 0.36
CHMLP26374 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHMLP26374 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.32■□□□□ 0.36
CHMLP26374 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.32■□□□□ 0.36
CHMLP26374 AC004923.1-202ENST00000642106 209 ntBASIC17.32■□□□□ 0.36
CHMLP26374 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CHMLP26374 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMLP26374 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHMLP26374 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC17.32■□□□□ 0.36
CHMLP26374 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMLP26374 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMLP26374 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMLP26374 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMLP26374 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMLP26374 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMLP26374 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHMLP26374 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMLP26374 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMLP26374 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMLP26374 NCLP1-201ENST00000445357 1963 ntBASIC17.31■□□□□ 0.36
CHMLP26374 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMLP26374 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC17.31■□□□□ 0.36
CHMLP26374 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CHMLP26374 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMLP26374 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMLP26374 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMLP26374 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC17.31■□□□□ 0.36
CHMLP26374 SHMT1P1-201ENST00000419974 1312 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms