Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTX3P26022 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTX3P26022 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.89□□□□□ -0.19
PTX3P26022 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PTX3P26022 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PTX3P26022 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PTX3P26022 AL008718.2-201ENST00000609206 1313 ntBASIC13.89□□□□□ -0.19
PTX3P26022 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PTX3P26022 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.88□□□□□ -0.19
PTX3P26022 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 AC090643.2-201ENST00000623442 2029 ntBASIC13.88□□□□□ -0.19
PTX3P26022 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PTX3P26022 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.88□□□□□ -0.19
PTX3P26022 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.88□□□□□ -0.19
PTX3P26022 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
PTX3P26022 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
PTX3P26022 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.88□□□□□ -0.19
PTX3P26022 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.88□□□□□ -0.19
PTX3P26022 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.88□□□□□ -0.19
PTX3P26022 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.88□□□□□ -0.19
PTX3P26022 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.88□□□□□ -0.19
PTX3P26022 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PTX3P26022 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.88□□□□□ -0.19
PTX3P26022 RNA5SP412-201ENST00000516234 123 ntBASIC13.88□□□□□ -0.19
PTX3P26022 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.88□□□□□ -0.19
PTX3P26022 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.88□□□□□ -0.19
PTX3P26022 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.88□□□□□ -0.19
PTX3P26022 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.88□□□□□ -0.19
PTX3P26022 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.88□□□□□ -0.19
PTX3P26022 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.88□□□□□ -0.19
PTX3P26022 AC010328.2-201ENST00000597698 1111 ntBASIC13.88□□□□□ -0.19
PTX3P26022 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.88□□□□□ -0.19
PTX3P26022 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.88□□□□□ -0.19
PTX3P26022 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
PTX3P26022 AL162426.1-201ENST00000624141 743 ntBASIC13.88□□□□□ -0.19
PTX3P26022 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.88□□□□□ -0.19
PTX3P26022 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
PTX3P26022 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PTX3P26022 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.88□□□□□ -0.19
PTX3P26022 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PTX3P26022 AL022313.4-201ENST00000562756 2046 ntBASIC13.88□□□□□ -0.19
PTX3P26022 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PTX3P26022 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PTX3P26022 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.88□□□□□ -0.19
PTX3P26022 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTX3P26022 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTX3P26022 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTX3P26022 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTX3P26022 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.87□□□□□ -0.19
PTX3P26022 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTX3P26022 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
PTX3P26022 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
PTX3P26022 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTX3P26022 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTX3P26022 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTX3P26022 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTX3P26022 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PTX3P26022 DMBT1P1-203ENST00000636837 4628 ntBASIC13.87□□□□□ -0.19
PTX3P26022 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTX3P26022 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTX3P26022 REXO1L6P-201ENST00000603433 1515 ntBASIC13.87□□□□□ -0.19
PTX3P26022 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.87□□□□□ -0.19
PTX3P26022 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PTX3P26022 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
PTX3P26022 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.87□□□□□ -0.19
PTX3P26022 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.87□□□□□ -0.19
PTX3P26022 USP17L6P-201ENST00000382470 1197 ntBASIC13.87□□□□□ -0.19
PTX3P26022 MIR658-201ENST00000385210 100 ntBASIC13.87□□□□□ -0.19
PTX3P26022 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTX3P26022 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTX3P26022 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.87□□□□□ -0.19
PTX3P26022 ST13P19-201ENST00000442505 1124 ntBASIC13.87□□□□□ -0.19
PTX3P26022 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.87□□□□□ -0.19
PTX3P26022 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTX3P26022 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.87□□□□□ -0.19
PTX3P26022 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.87□□□□□ -0.19
PTX3P26022 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.87□□□□□ -0.19
PTX3P26022 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms