Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL022313.4-201ENST00000562756 2046 ntBASIC14.59□□□□□ -0.07
HLA-DPA1P20036 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 AL591846.1-201ENST00000451736 433 ntBASIC14.59□□□□□ -0.07
HLA-DPA1P20036 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 AC005695.3-201ENST00000614522 232 ntBASIC14.59□□□□□ -0.07
HLA-DPA1P20036 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 AHCYP4-201ENST00000419201 1315 ntBASIC14.59□□□□□ -0.07
HLA-DPA1P20036 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 KRT8P24-201ENST00000560290 1559 ntBASIC14.59□□□□□ -0.07
HLA-DPA1P20036 CYP4F23P-201ENST00000593402 1579 ntBASIC14.59□□□□□ -0.07
HLA-DPA1P20036 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-DPA1P20036 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HLA-DPA1P20036 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.58□□□□□ -0.07
HLA-DPA1P20036 MBLAC2-202ENST00000514906 1936 ntBASIC14.58□□□□□ -0.07
HLA-DPA1P20036 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
HLA-DPA1P20036 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
HLA-DPA1P20036 AL359881.3-201ENST00000602640 1721 ntBASIC14.58□□□□□ -0.07
HLA-DPA1P20036 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 AC090643.2-201ENST00000623442 2029 ntBASIC14.58□□□□□ -0.08
HLA-DPA1P20036 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 AC003686.1-201ENST00000550956 1034 ntBASIC14.58□□□□□ -0.08
HLA-DPA1P20036 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 BNIP3P13-201ENST00000599968 566 ntBASIC14.58□□□□□ -0.08
HLA-DPA1P20036 AC007663.3-201ENST00000609632 465 ntBASIC14.58□□□□□ -0.08
HLA-DPA1P20036 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPA1P20036 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPA1P20036 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms