Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYP3A4P08684 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.07■□□□□ 0.16
CYP3A4P08684 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.07■□□□□ 0.16
CYP3A4P08684 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.07■□□□□ 0.16
CYP3A4P08684 RPL18AP8-201ENST00000486071 528 ntBASIC16.07■□□□□ 0.16
CYP3A4P08684 PRKXP1-201ENST00000561423 1122 ntBASIC16.07■□□□□ 0.16
CYP3A4P08684 RN7SL665P-201ENST00000578793 300 ntBASIC16.07■□□□□ 0.16
CYP3A4P08684 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.07■□□□□ 0.16
CYP3A4P08684 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.07■□□□□ 0.16
CYP3A4P08684 AC016629.1-201ENST00000596579 586 ntBASIC16.07■□□□□ 0.16
CYP3A4P08684 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.07■□□□□ 0.16
CYP3A4P08684 AC103691.2-201ENST00000618824 433 ntBASIC16.07■□□□□ 0.16
CYP3A4P08684 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYP3A4P08684 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYP3A4P08684 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC16.07■□□□□ 0.16
CYP3A4P08684 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CYP3A4P08684 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYP3A4P08684 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYP3A4P08684 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CYP3A4P08684 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYP3A4P08684 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CYP3A4P08684 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CYP3A4P08684 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CYP3A4P08684 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.06■□□□□ 0.16
CYP3A4P08684 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.06■□□□□ 0.16
CYP3A4P08684 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CYP3A4P08684 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CYP3A4P08684 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CYP3A4P08684 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CYP3A4P08684 AL591122.2-201ENST00000624125 1853 ntBASIC16.06■□□□□ 0.16
CYP3A4P08684 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CYP3A4P08684 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.06■□□□□ 0.16
CYP3A4P08684 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CYP3A4P08684 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.06■□□□□ 0.16
CYP3A4P08684 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CYP3A4P08684 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CYP3A4P08684 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.06■□□□□ 0.16
CYP3A4P08684 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CYP3A4P08684 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.06■□□□□ 0.16
CYP3A4P08684 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CYP3A4P08684 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.06■□□□□ 0.16
CYP3A4P08684 LINC00265-2P-201ENST00000413372 782 ntBASIC16.06■□□□□ 0.16
CYP3A4P08684 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.06■□□□□ 0.16
CYP3A4P08684 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CYP3A4P08684 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.06■□□□□ 0.16
CYP3A4P08684 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.06■□□□□ 0.16
CYP3A4P08684 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.06■□□□□ 0.16
CYP3A4P08684 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CYP3A4P08684 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.06■□□□□ 0.16
CYP3A4P08684 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.06■□□□□ 0.16
CYP3A4P08684 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
CYP3A4P08684 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.06■□□□□ 0.16
CYP3A4P08684 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CYP3A4P08684 AC079328.1-201ENST00000560358 952 ntBASIC16.06■□□□□ 0.16
CYP3A4P08684 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.06■□□□□ 0.16
CYP3A4P08684 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.06■□□□□ 0.16
CYP3A4P08684 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CYP3A4P08684 AC103810.10-201ENST00000606504 343 ntBASIC16.06■□□□□ 0.16
CYP3A4P08684 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.06■□□□□ 0.16
CYP3A4P08684 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.06■□□□□ 0.16
CYP3A4P08684 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.06■□□□□ 0.16
CYP3A4P08684 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CYP3A4P08684 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CYP3A4P08684 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CYP3A4P08684 AL009178.2-201ENST00000597278 2719 ntBASIC16.06■□□□□ 0.16
CYP3A4P08684 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.06■□□□□ 0.16
CYP3A4P08684 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CYP3A4P08684 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CYP3A4P08684 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CYP3A4P08684 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CYP3A4P08684 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.05■□□□□ 0.16
CYP3A4P08684 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CYP3A4P08684 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.05■□□□□ 0.16
CYP3A4P08684 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.05■□□□□ 0.16
CYP3A4P08684 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CYP3A4P08684 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CYP3A4P08684 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CYP3A4P08684 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CYP3A4P08684 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.05■□□□□ 0.16
CYP3A4P08684 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CYP3A4P08684 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CYP3A4P08684 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC16.05■□□□□ 0.16
CYP3A4P08684 AC091046.1-201ENST00000331871 207 ntBASIC16.05■□□□□ 0.16
CYP3A4P08684 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.05■□□□□ 0.16
CYP3A4P08684 AC130709.1-201ENST00000484779 1212 ntBASIC16.05■□□□□ 0.16
CYP3A4P08684 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.05■□□□□ 0.16
CYP3A4P08684 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CYP3A4P08684 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CYP3A4P08684 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CYP3A4P08684 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.05■□□□□ 0.16
CYP3A4P08684 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.05■□□□□ 0.16
CYP3A4P08684 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.05■□□□□ 0.16
CYP3A4P08684 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CYP3A4P08684 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.05■□□□□ 0.16
CYP3A4P08684 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CYP3A4P08684 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CYP3A4P08684 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CYP3A4P08684 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CYP3A4P08684 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.05■□□□□ 0.16
CYP3A4P08684 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 262.4 ms