Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC17.23■□□□□ 0.35
CHGBP05060 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHGBP05060 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CHGBP05060 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.23■□□□□ 0.35
CHGBP05060 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHGBP05060 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHGBP05060 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CHGBP05060 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHGBP05060 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CHGBP05060 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 NFIC-211ENST00000641145 8399 ntBASIC17.22■□□□□ 0.35
CHGBP05060 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CHGBP05060 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CHGBP05060 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 KRT17P5-201ENST00000332088 839 ntBASIC17.22■□□□□ 0.35
CHGBP05060 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 MBP-201ENST00000354542 575 ntTSL 2 BASIC17.22■□□□□ 0.35
CHGBP05060 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC17.22■□□□□ 0.35
CHGBP05060 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.22■□□□□ 0.35
CHGBP05060 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.22■□□□□ 0.35
CHGBP05060 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.22■□□□□ 0.35
CHGBP05060 ALG1L13P-202ENST00000519320 584 ntBASIC17.22■□□□□ 0.35
CHGBP05060 RHOQP1-201ENST00000555758 579 ntBASIC17.22■□□□□ 0.35
CHGBP05060 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC17.22■□□□□ 0.35
CHGBP05060 MIR3677-201ENST00000578964 60 ntBASIC17.22■□□□□ 0.35
CHGBP05060 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.22■□□□□ 0.35
CHGBP05060 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.22■□□□□ 0.35
CHGBP05060 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC17.22■□□□□ 0.35
CHGBP05060 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.22■□□□□ 0.35
CHGBP05060 MIR6769A-201ENST00000617340 73 ntBASIC17.22■□□□□ 0.35
CHGBP05060 CU633904.3-201ENST00000624042 1029 ntBASIC17.22■□□□□ 0.35
CHGBP05060 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC17.22■□□□□ 0.35
CHGBP05060 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CHGBP05060 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CHGBP05060 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC17.22■□□□□ 0.35
CHGBP05060 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CHGBP05060 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.22■□□□□ 0.35
CHGBP05060 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CHGBP05060 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHGBP05060 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.21■□□□□ 0.35
CHGBP05060 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CHGBP05060 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CHGBP05060 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CHGBP05060 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC17.21■□□□□ 0.35
CHGBP05060 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CHGBP05060 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CHGBP05060 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC17.21■□□□□ 0.35
CHGBP05060 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CHGBP05060 ELK2AP-201ENST00000392510 1007 ntBASIC17.21■□□□□ 0.35
CHGBP05060 BANF1P3-201ENST00000412556 261 ntBASIC17.21■□□□□ 0.35
CHGBP05060 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 AL008707.1-201ENST00000422498 534 ntBASIC17.21■□□□□ 0.35
CHGBP05060 RPL8P2-201ENST00000430538 502 ntBASIC17.21■□□□□ 0.35
CHGBP05060 RN7SL530P-201ENST00000485097 298 ntBASIC17.21■□□□□ 0.35
CHGBP05060 RN7SL720P-201ENST00000488178 304 ntBASIC17.21■□□□□ 0.35
CHGBP05060 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC17.21■□□□□ 0.35
CHGBP05060 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC17.21■□□□□ 0.35
CHGBP05060 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.21■□□□□ 0.35
CHGBP05060 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.21■□□□□ 0.35
CHGBP05060 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms