Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC15.52■□□□□ 0.08
CHRNA1P02708 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA1P02708 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.52■□□□□ 0.08
CHRNA1P02708 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA1P02708 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA1P02708 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.52■□□□□ 0.08
CHRNA1P02708 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA1P02708 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA1P02708 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CHRNA1P02708 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA1P02708 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA1P02708 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CHRNA1P02708 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.52■□□□□ 0.08
CHRNA1P02708 AC108734.2-201ENST00000420887 1069 ntBASIC15.52■□□□□ 0.08
CHRNA1P02708 AQP7P5-201ENST00000428759 1049 ntBASIC15.52■□□□□ 0.08
CHRNA1P02708 GCSHP3-201ENST00000431120 391 ntBASIC15.52■□□□□ 0.08
CHRNA1P02708 AQP7P4-201ENST00000447083 1042 ntBASIC15.52■□□□□ 0.08
CHRNA1P02708 AQP7P2-201ENST00000453967 1041 ntBASIC15.52■□□□□ 0.08
CHRNA1P02708 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC15.52■□□□□ 0.08
CHRNA1P02708 TPT1P11-201ENST00000458482 498 ntBASIC15.52■□□□□ 0.08
CHRNA1P02708 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA1P02708 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHRNA1P02708 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.52■□□□□ 0.08
CHRNA1P02708 AL118522.1-201ENST00000611368 560 ntBASIC15.52■□□□□ 0.08
CHRNA1P02708 AC138466.4-201ENST00000623965 852 ntBASIC15.52■□□□□ 0.08
CHRNA1P02708 AQP7P3-201ENST00000624547 1041 ntBASIC15.52■□□□□ 0.08
CHRNA1P02708 ST5-261ENST00000626808 1071 ntTSL 5 BASIC15.52■□□□□ 0.08
CHRNA1P02708 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHRNA1P02708 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CHRNA1P02708 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CHRNA1P02708 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHRNA1P02708 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHRNA1P02708 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CHRNA1P02708 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA1P02708 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC15.51■□□□□ 0.07
CHRNA1P02708 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA1P02708 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.51■□□□□ 0.07
CHRNA1P02708 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CHRNA1P02708 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.51■□□□□ 0.07
CHRNA1P02708 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA1P02708 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA1P02708 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.51■□□□□ 0.07
CHRNA1P02708 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CHRNA1P02708 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CHRNA1P02708 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CHRNA1P02708 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.51■□□□□ 0.07
CHRNA1P02708 SLC25A15P3-201ENST00000505530 290 ntBASIC15.51■□□□□ 0.07
CHRNA1P02708 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA1P02708 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CHRNA1P02708 MIR4265-201ENST00000582152 99 ntBASIC15.51■□□□□ 0.07
CHRNA1P02708 AP005264.5-201ENST00000590066 467 ntBASIC15.51■□□□□ 0.07
CHRNA1P02708 AC005357.2-202ENST00000590507 1060 ntBASIC15.51■□□□□ 0.07
CHRNA1P02708 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC15.51■□□□□ 0.07
CHRNA1P02708 FO393412.1-201ENST00000619841 382 ntBASIC15.51■□□□□ 0.07
CHRNA1P02708 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA1P02708 AC002472.4-201ENST00000641915 272 ntBASIC15.51■□□□□ 0.07
CHRNA1P02708 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA1P02708 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA1P02708 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA1P02708 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.51■□□□□ 0.07
CHRNA1P02708 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA1P02708 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA1P02708 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA1P02708 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA1P02708 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.51■□□□□ 0.07
CHRNA1P02708 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA1P02708 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA1P02708 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA1P02708 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA1P02708 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
CHRNA1P02708 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA1P02708 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA1P02708 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CHRNA1P02708 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA1P02708 ODCP-201ENST00000459650 1639 ntBASIC15.5■□□□□ 0.07
CHRNA1P02708 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA1P02708 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA1P02708 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC15.5■□□□□ 0.07
CHRNA1P02708 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
CHRNA1P02708 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.5■□□□□ 0.07
CHRNA1P02708 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA1P02708 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA1P02708 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA1P02708 SHMT1P1-201ENST00000419974 1312 ntBASIC15.5■□□□□ 0.07
CHRNA1P02708 PDXDC2P-206ENST00000534700 1315 ntBASIC15.5■□□□□ 0.07
CHRNA1P02708 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC15.5■□□□□ 0.07
CHRNA1P02708 AL022313.4-201ENST00000562756 2046 ntBASIC15.5■□□□□ 0.07
CHRNA1P02708 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA1P02708 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.5■□□□□ 0.07
CHRNA1P02708 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
CHRNA1P02708 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.5■□□□□ 0.07
CHRNA1P02708 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA1P02708 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CHRNA1P02708 AC103592.1-201ENST00000394513 664 ntBASIC15.5■□□□□ 0.07
CHRNA1P02708 MIR1227-201ENST00000408484 88 ntBASIC15.5■□□□□ 0.07
CHRNA1P02708 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.5■□□□□ 0.07
CHRNA1P02708 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC15.5■□□□□ 0.07
CHRNA1P02708 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC15.5■□□□□ 0.07
CHRNA1P02708 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC15.5■□□□□ 0.07
CHRNA1P02708 GNG10P1-201ENST00000452289 199 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms