Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.07□□□□□ -0.16
KRT6AP02538 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.07□□□□□ -0.16
KRT6AP02538 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.07□□□□□ -0.16
KRT6AP02538 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.07□□□□□ -0.16
KRT6AP02538 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
KRT6AP02538 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
KRT6AP02538 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
KRT6AP02538 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KRT6AP02538 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
KRT6AP02538 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.07□□□□□ -0.16
KRT6AP02538 CU639417.3-201ENST00000624240 1404 ntBASIC14.07□□□□□ -0.16
KRT6AP02538 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 DGCR9-201ENST00000609630 2415 ntBASIC14.06□□□□□ -0.16
KRT6AP02538 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.06□□□□□ -0.16
KRT6AP02538 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.06□□□□□ -0.16
KRT6AP02538 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.06□□□□□ -0.16
KRT6AP02538 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.06□□□□□ -0.16
KRT6AP02538 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
KRT6AP02538 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
KRT6AP02538 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.06□□□□□ -0.16
KRT6AP02538 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.06□□□□□ -0.16
KRT6AP02538 AC112492.5-201ENST00000421897 457 ntBASIC14.06□□□□□ -0.16
KRT6AP02538 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.06□□□□□ -0.16
KRT6AP02538 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.06□□□□□ -0.16
KRT6AP02538 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.06□□□□□ -0.16
KRT6AP02538 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.06□□□□□ -0.16
KRT6AP02538 AL596325.1-201ENST00000563991 1082 ntBASIC14.06□□□□□ -0.16
KRT6AP02538 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.06□□□□□ -0.16
KRT6AP02538 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
KRT6AP02538 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.06□□□□□ -0.16
KRT6AP02538 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.06□□□□□ -0.16
KRT6AP02538 AL358472.3-201ENST00000608147 415 ntBASIC14.06□□□□□ -0.16
KRT6AP02538 AC244669.2-201ENST00000612320 853 ntBASIC14.06□□□□□ -0.16
KRT6AP02538 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
KRT6AP02538 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.06□□□□□ -0.16
KRT6AP02538 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.06□□□□□ -0.16
KRT6AP02538 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.06□□□□□ -0.16
KRT6AP02538 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.06□□□□□ -0.16
KRT6AP02538 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
KRT6AP02538 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.06□□□□□ -0.16
KRT6AP02538 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
KRT6AP02538 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.06□□□□□ -0.16
KRT6AP02538 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
KRT6AP02538 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRT6AP02538 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
KRT6AP02538 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.05□□□□□ -0.16
KRT6AP02538 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KRT6AP02538 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT6AP02538 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.05□□□□□ -0.16
KRT6AP02538 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT6AP02538 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
KRT6AP02538 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KRT6AP02538 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT6AP02538 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KRT6AP02538 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT6AP02538 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT6AP02538 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT6AP02538 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT6AP02538 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KRT6AP02538 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KRT6AP02538 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT6AP02538 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KRT6AP02538 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRT6AP02538 AC006001.1-201ENST00000325130 474 ntBASIC14.05□□□□□ -0.16
KRT6AP02538 USP17L6P-201ENST00000382470 1197 ntBASIC14.05□□□□□ -0.16
KRT6AP02538 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.05□□□□□ -0.16
KRT6AP02538 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.05□□□□□ -0.16
KRT6AP02538 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.05□□□□□ -0.16
KRT6AP02538 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.05□□□□□ -0.16
KRT6AP02538 AL355994.2-201ENST00000447882 704 ntBASIC14.05□□□□□ -0.16
KRT6AP02538 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KRT6AP02538 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.05□□□□□ -0.16
KRT6AP02538 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.05□□□□□ -0.16
KRT6AP02538 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms