Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TIMP1P01033 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP1P01033 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP1P01033 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP1P01033 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP1P01033 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP1P01033 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP1P01033 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP1P01033 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP1P01033 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP1P01033 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.28■□□□□ 0.04
TIMP1P01033 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP1P01033 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP1P01033 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP1P01033 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP1P01033 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TIMP1P01033 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TIMP1P01033 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.27■□□□□ 0.04
TIMP1P01033 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP1P01033 DUT-208ENST00000559540 1441 ntTSL 2 BASIC15.27■□□□□ 0.04
TIMP1P01033 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP1P01033 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP1P01033 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP1P01033 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP1P01033 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP1P01033 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP1P01033 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP1P01033 RPL10-203ENST00000406022 748 ntTSL 3 BASIC15.27■□□□□ 0.04
TIMP1P01033 KRT19P4-201ENST00000443208 943 ntBASIC15.27■□□□□ 0.04
TIMP1P01033 AC147876.1-201ENST00000504408 322 ntBASIC15.27■□□□□ 0.04
TIMP1P01033 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.27■□□□□ 0.04
TIMP1P01033 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC15.27■□□□□ 0.04
TIMP1P01033 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC15.27■□□□□ 0.04
TIMP1P01033 PMEL-214ENST00000550447 901 ntTSL 3 BASIC15.27■□□□□ 0.04
TIMP1P01033 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC15.27■□□□□ 0.04
TIMP1P01033 DUT-207ENST00000559416 635 ntTSL 2 BASIC15.27■□□□□ 0.04
TIMP1P01033 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP1P01033 ANKRD26P1-203ENST00000569528 966 ntBASIC15.27■□□□□ 0.04
TIMP1P01033 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC15.27■□□□□ 0.04
TIMP1P01033 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.27■□□□□ 0.04
TIMP1P01033 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TIMP1P01033 PRMT1P1-201ENST00000604252 1009 ntBASIC15.27■□□□□ 0.04
TIMP1P01033 CSTP2-201ENST00000610599 398 ntBASIC15.27■□□□□ 0.04
TIMP1P01033 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC15.27■□□□□ 0.04
TIMP1P01033 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TIMP1P01033 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TIMP1P01033 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TIMP1P01033 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TIMP1P01033 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TIMP1P01033 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TIMP1P01033 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TIMP1P01033 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TIMP1P01033 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TIMP1P01033 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TIMP1P01033 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TIMP1P01033 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
TIMP1P01033 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
TIMP1P01033 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TIMP1P01033 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TIMP1P01033 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TIMP1P01033 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
TIMP1P01033 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.26■□□□□ 0.03
TIMP1P01033 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.26■□□□□ 0.03
TIMP1P01033 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
TIMP1P01033 HDGF-202ENST00000368206 960 ntTSL 5 BASIC15.26■□□□□ 0.03
TIMP1P01033 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC15.26■□□□□ 0.03
TIMP1P01033 DKKL1P1-201ENST00000400550 698 ntBASIC15.26■□□□□ 0.03
TIMP1P01033 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC15.26■□□□□ 0.03
TIMP1P01033 BMF-206ENST00000558774 671 ntTSL 3 BASIC15.26■□□□□ 0.03
TIMP1P01033 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC15.26■□□□□ 0.03
TIMP1P01033 RN7SL524P-201ENST00000581152 300 ntBASIC15.26■□□□□ 0.03
TIMP1P01033 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC15.26■□□□□ 0.03
TIMP1P01033 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC15.26■□□□□ 0.03
TIMP1P01033 AC080013.5-201ENST00000607044 679 ntBASIC15.26■□□□□ 0.03
TIMP1P01033 AL591424.3-201ENST00000614278 872 ntBASIC15.26■□□□□ 0.03
TIMP1P01033 AC090510.3-201ENST00000615831 821 ntBASIC15.26■□□□□ 0.03
TIMP1P01033 AC020904.3-201ENST00000624199 442 ntBASIC15.26■□□□□ 0.03
TIMP1P01033 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.26■□□□□ 0.03
TIMP1P01033 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TIMP1P01033 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms