Protein–RNA interactions for Protein: O76075

DFFB, DNA fragmentation factor subunit beta, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFBO76075 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
DFFBO76075 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
DFFBO76075 NCLP1-201ENST00000445357 1963 ntBASIC11.87□□□□□ -0.51
DFFBO76075 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 TUBB8P4-201ENST00000511806 1324 ntBASIC11.86□□□□□ -0.51
DFFBO76075 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
DFFBO76075 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC11.86□□□□□ -0.51
DFFBO76075 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
DFFBO76075 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.86□□□□□ -0.51
DFFBO76075 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC11.86□□□□□ -0.51
DFFBO76075 AC011498.7-201ENST00000624986 2027 ntBASIC11.86□□□□□ -0.51
DFFBO76075 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC11.86□□□□□ -0.51
DFFBO76075 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
DFFBO76075 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC11.86□□□□□ -0.51
DFFBO76075 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC11.86□□□□□ -0.51
DFFBO76075 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC11.86□□□□□ -0.51
DFFBO76075 BASP1P1-201ENST00000430708 665 ntBASIC11.86□□□□□ -0.51
DFFBO76075 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC11.86□□□□□ -0.51
DFFBO76075 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC11.86□□□□□ -0.51
DFFBO76075 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.86□□□□□ -0.51
DFFBO76075 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
DFFBO76075 AL512638.1-201ENST00000457493 794 ntBASIC11.86□□□□□ -0.51
DFFBO76075 RNA5SP421-201ENST00000516864 134 ntBASIC11.86□□□□□ -0.51
DFFBO76075 ZNF890P-202ENST00000530367 1156 ntBASIC11.86□□□□□ -0.51
DFFBO76075 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 TIMM17BP1-201ENST00000545713 516 ntBASIC11.86□□□□□ -0.51
DFFBO76075 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC11.86□□□□□ -0.51
DFFBO76075 KRT18P8-201ENST00000581937 1246 ntBASIC11.86□□□□□ -0.51
DFFBO76075 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.86□□□□□ -0.51
DFFBO76075 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
DFFBO76075 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
DFFBO76075 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.86□□□□□ -0.51
DFFBO76075 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
DFFBO76075 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC11.86□□□□□ -0.51
DFFBO76075 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
DFFBO76075 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
DFFBO76075 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC11.86□□□□□ -0.51
DFFBO76075 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
DFFBO76075 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.86□□□□□ -0.51
DFFBO76075 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.86□□□□□ -0.51
DFFBO76075 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
DFFBO76075 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC11.85□□□□□ -0.51
DFFBO76075 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
DFFBO76075 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC11.85□□□□□ -0.51
DFFBO76075 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
DFFBO76075 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
DFFBO76075 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.85□□□□□ -0.51
DFFBO76075 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.85□□□□□ -0.51
DFFBO76075 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC11.85□□□□□ -0.51
DFFBO76075 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
DFFBO76075 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
DFFBO76075 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
DFFBO76075 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.85□□□□□ -0.51
DFFBO76075 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
DFFBO76075 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
DFFBO76075 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
DFFBO76075 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
DFFBO76075 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
DFFBO76075 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
DFFBO76075 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC11.85□□□□□ -0.51
DFFBO76075 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC11.85□□□□□ -0.51
DFFBO76075 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
DFFBO76075 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
DFFBO76075 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
DFFBO76075 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
DFFBO76075 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
DFFBO76075 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.85□□□□□ -0.51
DFFBO76075 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
DFFBO76075 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
DFFBO76075 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.85□□□□□ -0.51
DFFBO76075 TLE1P1-201ENST00000422965 589 ntBASIC11.85□□□□□ -0.51
DFFBO76075 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
DFFBO76075 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC11.85□□□□□ -0.51
DFFBO76075 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms