Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.58□□□□□ -0.08
GPC4O75487 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.58□□□□□ -0.08
GPC4O75487 AC239800.4-201ENST00000603712 296 ntBASIC14.58□□□□□ -0.08
GPC4O75487 AP001002.3-201ENST00000623482 206 ntBASIC14.58□□□□□ -0.08
GPC4O75487 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.58□□□□□ -0.08
GPC4O75487 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.58□□□□□ -0.08
GPC4O75487 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
GPC4O75487 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.58□□□□□ -0.08
GPC4O75487 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
GPC4O75487 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.58□□□□□ -0.08
GPC4O75487 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 AL136172.1-201ENST00000598590 1394 ntBASIC14.58□□□□□ -0.08
GPC4O75487 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.58□□□□□ -0.08
GPC4O75487 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
GPC4O75487 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 AL136309.1-201ENST00000403917 691 ntBASIC14.57□□□□□ -0.08
GPC4O75487 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.57□□□□□ -0.08
GPC4O75487 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.57□□□□□ -0.08
GPC4O75487 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.57□□□□□ -0.08
GPC4O75487 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.57□□□□□ -0.08
GPC4O75487 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.57□□□□□ -0.08
GPC4O75487 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.57□□□□□ -0.08
GPC4O75487 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.57□□□□□ -0.08
GPC4O75487 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.57□□□□□ -0.08
GPC4O75487 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
GPC4O75487 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
GPC4O75487 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.57□□□□□ -0.08
GPC4O75487 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.57□□□□□ -0.08
GPC4O75487 AL359183.1-201ENST00000623796 2132 ntBASIC14.57□□□□□ -0.08
GPC4O75487 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.57□□□□□ -0.08
GPC4O75487 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.57□□□□□ -0.08
GPC4O75487 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.57□□□□□ -0.08
GPC4O75487 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
GPC4O75487 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
GPC4O75487 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.57□□□□□ -0.08
GPC4O75487 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
GPC4O75487 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GPC4O75487 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.56□□□□□ -0.08
GPC4O75487 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
GPC4O75487 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.56□□□□□ -0.08
GPC4O75487 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GPC4O75487 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.56□□□□□ -0.08
GPC4O75487 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.56□□□□□ -0.08
GPC4O75487 CNN2P10-201ENST00000443067 918 ntBASIC14.56□□□□□ -0.08
GPC4O75487 CHMP1AP1-201ENST00000445563 662 ntBASIC14.56□□□□□ -0.08
GPC4O75487 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.56□□□□□ -0.08
GPC4O75487 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms