Protein–RNA interactions for Protein: O15068

MCF2L, Guanine nucleotide exchange factor DBS, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2LO15068 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MCF2LO15068 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MCF2LO15068 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MCF2LO15068 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MCF2LO15068 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MCF2LO15068 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MCF2LO15068 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.17■□□□□ 0.02
MCF2LO15068 AC004945.1-201ENST00000416738 983 ntBASIC15.17■□□□□ 0.02
MCF2LO15068 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MCF2LO15068 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MCF2LO15068 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.17■□□□□ 0.02
MCF2LO15068 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.17■□□□□ 0.02
MCF2LO15068 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.17■□□□□ 0.02
MCF2LO15068 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.17■□□□□ 0.02
MCF2LO15068 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.17■□□□□ 0.02
MCF2LO15068 AC005695.3-201ENST00000614522 232 ntBASIC15.17■□□□□ 0.02
MCF2LO15068 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MCF2LO15068 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
MCF2LO15068 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.17■□□□□ 0.02
MCF2LO15068 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.17■□□□□ 0.02
MCF2LO15068 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MCF2LO15068 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
MCF2LO15068 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.17■□□□□ 0.02
MCF2LO15068 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
MCF2LO15068 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.17■□□□□ 0.02
MCF2LO15068 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MCF2LO15068 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
MCF2LO15068 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MCF2LO15068 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.17■□□□□ 0.02
MCF2LO15068 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MCF2LO15068 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
MCF2LO15068 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.16■□□□□ 0.02
MCF2LO15068 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
MCF2LO15068 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
MCF2LO15068 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
MCF2LO15068 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.16■□□□□ 0.02
MCF2LO15068 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.16■□□□□ 0.02
MCF2LO15068 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
MCF2LO15068 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.16■□□□□ 0.02
MCF2LO15068 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.16■□□□□ 0.02
MCF2LO15068 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.16■□□□□ 0.02
MCF2LO15068 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.16■□□□□ 0.02
MCF2LO15068 AC006033.1-201ENST00000440505 426 ntBASIC15.16■□□□□ 0.02
MCF2LO15068 HSPB1P2-201ENST00000448722 546 ntBASIC15.16■□□□□ 0.02
MCF2LO15068 AC104306.2-201ENST00000451877 341 ntBASIC15.16■□□□□ 0.02
MCF2LO15068 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.16■□□□□ 0.02
MCF2LO15068 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.16■□□□□ 0.02
MCF2LO15068 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.16■□□□□ 0.02
MCF2LO15068 AC104982.3-201ENST00000581995 514 ntBASIC15.16■□□□□ 0.02
MCF2LO15068 AL118558.3-201ENST00000607414 1079 ntBASIC15.16■□□□□ 0.02
MCF2LO15068 AL096828.3-201ENST00000615354 462 ntBASIC15.16■□□□□ 0.02
MCF2LO15068 MIR6787-201ENST00000616675 61 ntBASIC15.16■□□□□ 0.02
MCF2LO15068 GPR182-203ENST00000622922 591 ntBASIC15.16■□□□□ 0.02
MCF2LO15068 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.16■□□□□ 0.02
MCF2LO15068 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
MCF2LO15068 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
MCF2LO15068 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
MCF2LO15068 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.16■□□□□ 0.02
MCF2LO15068 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.16■□□□□ 0.02
MCF2LO15068 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
MCF2LO15068 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
MCF2LO15068 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MCF2LO15068 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
MCF2LO15068 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MCF2LO15068 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.15■□□□□ 0.02
MCF2LO15068 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
MCF2LO15068 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.15■□□□□ 0.02
MCF2LO15068 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
MCF2LO15068 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MCF2LO15068 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MCF2LO15068 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
MCF2LO15068 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MCF2LO15068 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MCF2LO15068 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MCF2LO15068 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MCF2LO15068 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms