Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 GOLGA8EP-201ENST00000530246 1959 ntBASIC18.3■□□□□ 0.52
CHL1O00533 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHL1O00533 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHL1O00533 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHL1O00533 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC18.3■□□□□ 0.52
CHL1O00533 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHL1O00533 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHL1O00533 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHL1O00533 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHL1O00533 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHL1O00533 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHL1O00533 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHL1O00533 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CHL1O00533 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHL1O00533 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC18.3■□□□□ 0.52
CHL1O00533 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHL1O00533 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHL1O00533 AC078991.1-201ENST00000437297 610 ntBASIC18.3■□□□□ 0.52
CHL1O00533 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC18.3■□□□□ 0.52
CHL1O00533 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC18.3■□□□□ 0.52
CHL1O00533 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC18.3■□□□□ 0.52
CHL1O00533 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC18.3■□□□□ 0.52
CHL1O00533 RN7SL788P-201ENST00000460504 316 ntBASIC18.3■□□□□ 0.52
CHL1O00533 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
CHL1O00533 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC18.3■□□□□ 0.52
CHL1O00533 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC18.3■□□□□ 0.52
CHL1O00533 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CHL1O00533 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHL1O00533 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHL1O00533 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHL1O00533 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CHL1O00533 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHL1O00533 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC18.3■□□□□ 0.52
CHL1O00533 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHL1O00533 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHL1O00533 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHL1O00533 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC18.3■□□□□ 0.52
CHL1O00533 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHL1O00533 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CHL1O00533 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC18.29■□□□□ 0.52
CHL1O00533 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC18.29■□□□□ 0.52
CHL1O00533 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHL1O00533 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC18.29■□□□□ 0.52
CHL1O00533 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHL1O00533 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHL1O00533 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHL1O00533 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHL1O00533 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHL1O00533 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
CHL1O00533 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC18.29■□□□□ 0.52
CHL1O00533 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHL1O00533 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHL1O00533 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHL1O00533 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHL1O00533 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHL1O00533 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC18.29■□□□□ 0.52
CHL1O00533 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHL1O00533 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHL1O00533 DNAJB1P1-201ENST00000429417 1024 ntBASIC18.29■□□□□ 0.52
CHL1O00533 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC18.29■□□□□ 0.52
CHL1O00533 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC18.29■□□□□ 0.52
CHL1O00533 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CHL1O00533 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC18.29■□□□□ 0.52
CHL1O00533 MIR2392-201ENST00000584881 84 ntBASIC18.29■□□□□ 0.52
CHL1O00533 AC007881.3-201ENST00000608897 607 ntBASIC18.29■□□□□ 0.52
CHL1O00533 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CHL1O00533 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHL1O00533 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHL1O00533 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHL1O00533 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC18.29■□□□□ 0.52
CHL1O00533 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CHL1O00533 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CHL1O00533 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHL1O00533 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CHL1O00533 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CHL1O00533 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHL1O00533 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC18.28■□□□□ 0.52
CHL1O00533 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CHL1O00533 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHL1O00533 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHL1O00533 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHL1O00533 RCC2P1-201ENST00000452257 1476 ntBASIC18.28■□□□□ 0.52
CHL1O00533 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CHL1O00533 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHL1O00533 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHL1O00533 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CHL1O00533 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHL1O00533 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHL1O00533 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CHL1O00533 AL009178.2-201ENST00000597278 2719 ntBASIC18.28■□□□□ 0.52
CHL1O00533 SAT1-201ENST00000379251 801 ntTSL 2 BASIC18.28■□□□□ 0.52
CHL1O00533 SAT1-202ENST00000379253 909 ntTSL 2 BASIC18.28■□□□□ 0.52
CHL1O00533 SAT1-203ENST00000379254 868 ntTSL 3 BASIC18.28■□□□□ 0.52
CHL1O00533 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHL1O00533 GUSBP10-201ENST00000417412 665 ntBASIC18.28■□□□□ 0.52
CHL1O00533 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CHL1O00533 RN7SL181P-201ENST00000462921 277 ntBASIC18.28■□□□□ 0.52
CHL1O00533 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHL1O00533 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC18.28■□□□□ 0.52
CHL1O00533 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms