Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 HLA-V-204ENST00000476601 1289 ntBASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 GIMAP3P-201ENST00000495150 836 ntBASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 AC027237.1-201ENST00000560942 655 ntBASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 AC093520.2-201ENST00000561830 333 ntBASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 AC005586.2-201ENST00000563946 837 ntBASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 AC092337.1-201ENST00000568699 1129 ntBASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 AC093813.1-201ENST00000605066 256 ntBASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC14.68□□□□□ -0.06
HMGB1P1B2RPK0 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 AC015819.3-201ENST00000624305 2674 ntBASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 AC003958.1-201ENST00000435883 421 ntBASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 AC104758.3-203ENST00000562938 2123 ntBASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 AC009955.4-201ENST00000597192 544 ntBASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 AL391069.4-201ENST00000609583 481 ntBASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 AL596442.2-201ENST00000610240 980 ntBASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 TEX28P1-201ENST00000613479 1221 ntBASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 TEX28P2-201ENST00000617764 1221 ntBASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGB1P1B2RPK0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.66□□□□□ -0.06
HMGB1P1B2RPK0 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 587.6 ms