Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.72□□□□□ -0.21
LRIT2A6NDA9 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.72□□□□□ -0.21
LRIT2A6NDA9 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.72□□□□□ -0.21
LRIT2A6NDA9 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRIT2A6NDA9 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.72□□□□□ -0.21
LRIT2A6NDA9 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 AP002353.1-201ENST00000528257 1599 ntBASIC13.71□□□□□ -0.21
LRIT2A6NDA9 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 AC092580.1-201ENST00000433998 658 ntBASIC13.71□□□□□ -0.21
LRIT2A6NDA9 AC006033.1-201ENST00000440505 426 ntBASIC13.71□□□□□ -0.21
LRIT2A6NDA9 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRIT2A6NDA9 AL157996.1-201ENST00000624684 2299 ntBASIC13.71□□□□□ -0.21
LRIT2A6NDA9 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRIT2A6NDA9 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRIT2A6NDA9 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRIT2A6NDA9 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.71□□□□□ -0.22
LRIT2A6NDA9 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRIT2A6NDA9 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LRIT2A6NDA9 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.71□□□□□ -0.22
LRIT2A6NDA9 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRIT2A6NDA9 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRIT2A6NDA9 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LRIT2A6NDA9 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
LRIT2A6NDA9 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 AC007274.1-201ENST00000439805 662 ntBASIC13.7□□□□□ -0.22
LRIT2A6NDA9 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 AP001258.2-201ENST00000529891 490 ntBASIC13.7□□□□□ -0.22
LRIT2A6NDA9 AL512310.5-201ENST00000551999 515 ntBASIC13.7□□□□□ -0.22
LRIT2A6NDA9 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.7□□□□□ -0.22
LRIT2A6NDA9 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 268.9 ms