Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 MARK2P9-201ENST00000430958 1727 ntBASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 SERF2-209ENST00000409646 559 ntTSL 4 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 PPP6R2P1-201ENST00000450880 1275 ntBASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 SLBP-205ENST00000488267 987 ntTSL 2 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 F2-205ENST00000530231 1849 ntTSL 5 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 TNRC18P1-201ENST00000502875 3650 ntBASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 POM121L14P-201ENST00000406100 1558 ntBASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 AC009474.1-201ENST00000455096 1565 ntBASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RCL1Q9Y2P8 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 AMT-221ENST00000538581 2038 ntTSL 2 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
RCL1Q9Y2P8 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms