Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
NPIPA1Q9UND3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 MAGEA5-201ENST00000446757 942 ntBASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 AL596276.2-201ENST00000447525 331 ntBASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 EEF1DP6-201ENST00000449232 372 ntBASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 HLA-J-204ENST00000495278 958 ntBASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 SCARNA21-201ENST00000517026 139 ntBASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 AL132994.2-201ENST00000603120 687 ntBASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 MIR6720-201ENST00000611664 98 ntBASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 AC027601.3-201ENST00000622907 509 ntBASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 AC079336.7-201ENST00000623428 1078 ntBASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 AL354702.1-201ENST00000442006 1960 ntBASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA1Q9UND3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 AC097359.2-201ENST00000604992 2389 ntBASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 AL136172.1-201ENST00000598590 1394 ntBASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.37□□□□□ -0.27
NPIPA1Q9UND3 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms