Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 LINC01815-202ENST00000641468 1409 ntBASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 AC068418.2-201ENST00000577309 3703 ntBASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 AC008267.1-201ENST00000474858 1069 ntBASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 RN7SL81P-201ENST00000493781 261 ntBASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 IQSEC3P1-201ENST00000538799 536 ntBASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
DENND2AQ9ULE3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 HLA-DQB1-202ENST00000399079 1501 ntBASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 MIR645-201ENST00000385283 94 ntBASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 DNAJB1P1-201ENST00000429417 1024 ntBASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 AP002803.1-201ENST00000528836 498 ntBASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 AC087045.2-201ENST00000606279 1003 ntBASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 BX640514.1-201ENST00000583223 1918 ntBASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND2AQ9ULE3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DENND2AQ9ULE3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms