Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
THUMPD1Q9NXG2 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 AL591122.2-201ENST00000624125 1853 ntBASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
THUMPD1Q9NXG2 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
THUMPD1Q9NXG2 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
THUMPD1Q9NXG2 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 AL356585.2-201ENST00000625078 2396 ntBASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 AL136309.1-201ENST00000403917 691 ntBASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 CRB3P1-201ENST00000449338 276 ntBASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.64□□□□□ -0.23
THUMPD1Q9NXG2 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms