Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 MIR346-201ENST00000362234 95 ntBASIC17.35■□□□□ 0.37
RTN4Q9NQC3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 AL355306.1-201ENST00000415580 579 ntBASIC17.35■□□□□ 0.37
RTN4Q9NQC3 AL671277.1-201ENST00000429656 993 ntBASIC17.35■□□□□ 0.37
RTN4Q9NQC3 ANKRD20A11P-205ENST00000442192 920 ntTSL 3 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 KRT126P-201ENST00000549467 1181 ntBASIC17.35■□□□□ 0.37
RTN4Q9NQC3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 LINC00570-201ENST00000417473 1330 ntTSL 2 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 AC007342.9-201ENST00000623877 1385 ntBASIC17.35■□□□□ 0.37
RTN4Q9NQC3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 GOLGA8VP-201ENST00000559009 1798 ntBASIC17.35■□□□□ 0.37
RTN4Q9NQC3 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 FAM157C-204ENST00000570230 2184 ntTSL 5 BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4Q9NQC3 SLC39A13-204ENST00000524928 3553 ntTSL 2 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.34■□□□□ 0.37
RTN4Q9NQC3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN4Q9NQC3 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RTN4Q9NQC3 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTN4Q9NQC3 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTN4Q9NQC3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RTN4Q9NQC3 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC17.33■□□□□ 0.37
RTN4Q9NQC3 RPS2P45-201ENST00000469997 2057 ntBASIC17.33■□□□□ 0.37
RTN4Q9NQC3 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
RTN4Q9NQC3 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTN4Q9NQC3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTN4Q9NQC3 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RTN4Q9NQC3 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTN4Q9NQC3 TIGAR-204ENST00000635110 3633 ntTSL 5 BASIC17.33■□□□□ 0.37
RTN4Q9NQC3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.33■□□□□ 0.37
RTN4Q9NQC3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RTN4Q9NQC3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTN4Q9NQC3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms