Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 AL161670.2-201ENST00000557650 1227 ntBASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 FGFR3P5-201ENST00000564496 886 ntBASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 AC021016.3-201ENST00000608367 477 ntBASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 MIR6074-201ENST00000612054 107 ntBASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 AF254983.2-201ENST00000612331 135 ntBASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VAT1LQ9HCJ6 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 AC020922.3-201ENST00000595064 547 ntBASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 AL606495.2-201ENST00000605867 535 ntBASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 AC068587.10-201ENST00000641210 219 ntBASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.73■□□□□ 0.27
VAT1LQ9HCJ6 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 PDIA3P2-201ENST00000428073 158 ntBASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 UPF3AP2-201ENST00000457924 1132 ntBASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 AC091812.3-201ENST00000621362 345 ntBASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 AL591471.1-201ENST00000621855 229 ntBASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VAT1LQ9HCJ6 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms