Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 LINP1-201ENST00000417112 917 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 AL451000.1-201ENST00000451300 1186 ntBASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 COQ10BP2-201ENST00000513804 724 ntBASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 APOC1-209ENST00000592885 562 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 AL049840.2-201ENST00000602722 535 ntBASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH11YQ9BZA8 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 FKBP4P8-201ENST00000610931 1369 ntBASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 AL590824.1-201ENST00000403828 1349 ntBASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 AL022313.4-201ENST00000562756 2046 ntBASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 HMGA1P1-201ENST00000415560 1062 ntBASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 FAM21EP-201ENST00000417804 985 ntBASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 EEF1DP2-201ENST00000433698 843 ntBASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDH11YQ9BZA8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 PIFO-201ENST00000369737 746 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 AC090505.1-201ENST00000430515 1834 ntBASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms