Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTFDC1Q9BY42 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 TBC1D27-202ENST00000424239 1573 ntBASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 RPL3P2-204ENST00000413027 1203 ntBASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 RN7SL128P-201ENST00000467883 305 ntBASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 AC100858.1-201ENST00000514059 1228 ntBASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 DGAT2L7P-201ENST00000602462 744 ntBASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 AC148477.9-201ENST00000623974 539 ntBASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 AL365181.1-201ENST00000564032 1828 ntBASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTFDC1Q9BY42 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 AC117503.4-201ENST00000623229 1418 ntBASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 AL929302.1-201ENST00000426556 871 ntBASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 AC004554.1-201ENST00000422830 1468 ntBASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTFDC1Q9BY42 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 FAM21EP-201ENST00000417804 985 ntBASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 KRT18P15-201ENST00000458108 1291 ntBASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms