Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.34■□□□□ 0.37
CRAMP1Q96RY5 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.34■□□□□ 0.37
CRAMP1Q96RY5 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.34■□□□□ 0.37
CRAMP1Q96RY5 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC17.34■□□□□ 0.37
CRAMP1Q96RY5 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.34■□□□□ 0.37
CRAMP1Q96RY5 AL049840.2-201ENST00000602722 535 ntBASIC17.34■□□□□ 0.37
CRAMP1Q96RY5 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC17.34■□□□□ 0.37
CRAMP1Q96RY5 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC17.34■□□□□ 0.37
CRAMP1Q96RY5 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CRAMP1Q96RY5 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC17.34■□□□□ 0.37
CRAMP1Q96RY5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CRAMP1Q96RY5 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CRAMP1Q96RY5 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CRAMP1Q96RY5 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.33■□□□□ 0.37
CRAMP1Q96RY5 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CRAMP1Q96RY5 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CRAMP1Q96RY5 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CRAMP1Q96RY5 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CRAMP1Q96RY5 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17.33■□□□□ 0.37
CRAMP1Q96RY5 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CRAMP1Q96RY5 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 FKBP4P8-201ENST00000610931 1369 ntBASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 ABCD1P4-201ENST00000399687 604 ntBASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 LINP1-201ENST00000417112 917 ntTSL 2 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 TPT1P11-201ENST00000458482 498 ntBASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 COQ10BP2-201ENST00000513804 724 ntBASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 AC087203.1-201ENST00000532111 1181 ntBASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 HNRNPA1P5-201ENST00000558213 966 ntBASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 APOC1-209ENST00000592885 562 ntTSL 3 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 AC073869.4-201ENST00000620841 800 ntBASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 MTHFR-210ENST00000641407 2387 ntBASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 USP39-220ENST00000613444 2161 ntTSL 2 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 RN7SL832P-201ENST00000607781 1756 ntBASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.33■□□□□ 0.36
CRAMP1Q96RY5 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 AL590824.1-201ENST00000403828 1349 ntBASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 AL512599.1-201ENST00000430724 685 ntBASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 AL031673.1-201ENST00000611460 466 ntBASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CRAMP1Q96RY5 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms