Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPNE2Q96FN4 AL132655.2-201ENST00000596276 594 ntBASIC12.68□□□□□ -0.38
CPNE2Q96FN4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.68□□□□□ -0.38
CPNE2Q96FN4 AC138696.2-201ENST00000607376 223 ntBASIC12.68□□□□□ -0.38
CPNE2Q96FN4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPNE2Q96FN4 AC004790.1-201ENST00000612686 536 ntBASIC12.68□□□□□ -0.38
CPNE2Q96FN4 CU634019.7-201ENST00000624153 1185 ntBASIC12.68□□□□□ -0.38
CPNE2Q96FN4 AC005252.2-201ENST00000624630 1141 ntBASIC12.68□□□□□ -0.38
CPNE2Q96FN4 FP236241.2-201ENST00000624906 1185 ntBASIC12.68□□□□□ -0.38
CPNE2Q96FN4 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
CPNE2Q96FN4 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPNE2Q96FN4 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CPNE2Q96FN4 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CPNE2Q96FN4 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CPNE2Q96FN4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPNE2Q96FN4 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.68□□□□□ -0.38
CPNE2Q96FN4 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPNE2Q96FN4 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPNE2Q96FN4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CPNE2Q96FN4 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
CPNE2Q96FN4 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPNE2Q96FN4 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CPNE2Q96FN4 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CPNE2Q96FN4 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CPNE2Q96FN4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.68□□□□□ -0.38
CPNE2Q96FN4 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CPNE2Q96FN4 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.68□□□□□ -0.38
CPNE2Q96FN4 AC139712.1-201ENST00000378256 1875 ntBASIC12.68□□□□□ -0.38
CPNE2Q96FN4 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CPNE2Q96FN4 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 NUTM2HP-201ENST00000442076 2498 ntBASIC12.67□□□□□ -0.38
CPNE2Q96FN4 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 FTLP10-202ENST00000505798 471 ntBASIC12.67□□□□□ -0.38
CPNE2Q96FN4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.67□□□□□ -0.38
CPNE2Q96FN4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 RN7SL48P-201ENST00000579283 293 ntBASIC12.67□□□□□ -0.38
CPNE2Q96FN4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.67□□□□□ -0.38
CPNE2Q96FN4 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 AC007541.1-201ENST00000570282 1469 ntBASIC12.66□□□□□ -0.38
CPNE2Q96FN4 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CPNE2Q96FN4 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms