Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 AC079414.2-201ENST00000567157 1104 ntBASIC16.56■□□□□ 0.24
CDCA5Q96FF9 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 MIR4746-201ENST00000579802 71 ntBASIC16.56■□□□□ 0.24
CDCA5Q96FF9 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 AL591424.3-201ENST00000614278 872 ntBASIC16.56■□□□□ 0.24
CDCA5Q96FF9 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA5Q96FF9 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 AC091951.1-201ENST00000512854 2465 ntBASIC16.55■□□□□ 0.24
CDCA5Q96FF9 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 AL137244.1-201ENST00000422931 865 ntBASIC16.55■□□□□ 0.24
CDCA5Q96FF9 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 AL049840.2-201ENST00000602722 535 ntBASIC16.55■□□□□ 0.24
CDCA5Q96FF9 PRMT1P1-201ENST00000604252 1009 ntBASIC16.55■□□□□ 0.24
CDCA5Q96FF9 NEK4P3-201ENST00000604859 544 ntBASIC16.55■□□□□ 0.24
CDCA5Q96FF9 AC090510.3-201ENST00000615831 821 ntBASIC16.55■□□□□ 0.24
CDCA5Q96FF9 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC16.55■□□□□ 0.24
CDCA5Q96FF9 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 AC020931.1-201ENST00000589622 1346 ntBASIC16.54■□□□□ 0.24
CDCA5Q96FF9 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 SNX15-201ENST00000352068 771 ntTSL 5 BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 DUT-207ENST00000559416 635 ntTSL 2 BASIC16.54■□□□□ 0.24
CDCA5Q96FF9 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms