Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 AP000358.1-201ENST00000456260 156 ntBASIC13.02□□□□□ -0.33
PHF3Q92576 NDUFS6P1-201ENST00000485187 316 ntBASIC13.02□□□□□ -0.33
PHF3Q92576 AC006122.1-201ENST00000493323 440 ntBASIC13.02□□□□□ -0.33
PHF3Q92576 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.02□□□□□ -0.33
PHF3Q92576 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
PHF3Q92576 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
PHF3Q92576 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.02□□□□□ -0.33
PHF3Q92576 AL022334.2-201ENST00000610000 484 ntBASIC13.02□□□□□ -0.33
PHF3Q92576 AP003419.4-201ENST00000616071 517 ntBASIC13.02□□□□□ -0.33
PHF3Q92576 CMC2-224ENST00000630396 481 ntTSL 5 BASIC13.02□□□□□ -0.33
PHF3Q92576 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
PHF3Q92576 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PHF3Q92576 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.02□□□□□ -0.33
PHF3Q92576 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC13.02□□□□□ -0.33
PHF3Q92576 AC092978.1-202ENST00000637590 1327 ntBASIC13.02□□□□□ -0.33
PHF3Q92576 AL136172.1-201ENST00000598590 1394 ntBASIC13.02□□□□□ -0.33
PHF3Q92576 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
PHF3Q92576 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
PHF3Q92576 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PHF3Q92576 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.02□□□□□ -0.33
PHF3Q92576 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PHF3Q92576 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.02□□□□□ -0.33
PHF3Q92576 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PHF3Q92576 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
PHF3Q92576 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
PHF3Q92576 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.02□□□□□ -0.33
PHF3Q92576 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC13.01□□□□□ -0.33
PHF3Q92576 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
PHF3Q92576 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
PHF3Q92576 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.01□□□□□ -0.33
PHF3Q92576 CICP12-201ENST00000455801 843 ntBASIC13.01□□□□□ -0.33
PHF3Q92576 AC104784.1-201ENST00000473096 294 ntBASIC13.01□□□□□ -0.33
PHF3Q92576 CTBP2P4-201ENST00000513884 920 ntBASIC13.01□□□□□ -0.33
PHF3Q92576 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC13.01□□□□□ -0.33
PHF3Q92576 SCARNA21-201ENST00000517026 139 ntBASIC13.01□□□□□ -0.33
PHF3Q92576 POU5F1P2-201ENST00000521750 823 ntBASIC13.01□□□□□ -0.33
PHF3Q92576 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.01□□□□□ -0.33
PHF3Q92576 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
PHF3Q92576 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.01□□□□□ -0.33
PHF3Q92576 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC13.01□□□□□ -0.33
PHF3Q92576 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.01□□□□□ -0.33
PHF3Q92576 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.01□□□□□ -0.33
PHF3Q92576 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.01□□□□□ -0.33
PHF3Q92576 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.01□□□□□ -0.33
PHF3Q92576 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
PHF3Q92576 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.01□□□□□ -0.33
PHF3Q92576 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
PHF3Q92576 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
PHF3Q92576 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
PHF3Q92576 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.01□□□□□ -0.33
PHF3Q92576 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.01□□□□□ -0.33
PHF3Q92576 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
PHF3Q92576 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC13.01□□□□□ -0.33
PHF3Q92576 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.01□□□□□ -0.33
PHF3Q92576 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.01□□□□□ -0.33
PHF3Q92576 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.01□□□□□ -0.33
PHF3Q92576 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
PHF3Q92576 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.01□□□□□ -0.33
PHF3Q92576 MIR6720-201ENST00000611664 98 ntBASIC13.01□□□□□ -0.33
PHF3Q92576 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.01□□□□□ -0.33
PHF3Q92576 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 RN7SL832P-201ENST00000607781 1756 ntBASIC13.01□□□□□ -0.33
PHF3Q92576 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.01□□□□□ -0.33
PHF3Q92576 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.01□□□□□ -0.33
PHF3Q92576 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.01□□□□□ -0.33
PHF3Q92576 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
PHF3Q92576 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PHF3Q92576 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PHF3Q92576 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms