Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC12.78□□□□□ -0.36
AP3S1Q92572 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
AP3S1Q92572 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.78□□□□□ -0.36
AP3S1Q92572 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 AC060814.4-201ENST00000594169 2163 ntBASIC12.78□□□□□ -0.36
AP3S1Q92572 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
AP3S1Q92572 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.78□□□□□ -0.36
AP3S1Q92572 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
AP3S1Q92572 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
AP3S1Q92572 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
AP3S1Q92572 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
AP3S1Q92572 AC139712.1-201ENST00000378256 1875 ntBASIC12.78□□□□□ -0.36
AP3S1Q92572 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
AP3S1Q92572 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S1Q92572 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP3S1Q92572 AGGF1P10-201ENST00000635005 2191 ntBASIC12.77□□□□□ -0.36
AP3S1Q92572 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.77□□□□□ -0.36
AP3S1Q92572 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP3S1Q92572 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP3S1Q92572 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP3S1Q92572 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
AP3S1Q92572 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP3S1Q92572 AC026271.4-201ENST00000578214 1833 ntBASIC12.77□□□□□ -0.37
AP3S1Q92572 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S1Q92572 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.77□□□□□ -0.37
AP3S1Q92572 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
AP3S1Q92572 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S1Q92572 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S1Q92572 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S1Q92572 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S1Q92572 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.77□□□□□ -0.37
AP3S1Q92572 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
AP3S1Q92572 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.77□□□□□ -0.37
AP3S1Q92572 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.77□□□□□ -0.37
AP3S1Q92572 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.77□□□□□ -0.37
AP3S1Q92572 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.77□□□□□ -0.37
AP3S1Q92572 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
AP3S1Q92572 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.77□□□□□ -0.37
AP3S1Q92572 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.77□□□□□ -0.37
AP3S1Q92572 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S1Q92572 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.77□□□□□ -0.37
AP3S1Q92572 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
AP3S1Q92572 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.77□□□□□ -0.37
AP3S1Q92572 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.77□□□□□ -0.37
AP3S1Q92572 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.77□□□□□ -0.37
AP3S1Q92572 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.77□□□□□ -0.37
AP3S1Q92572 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S1Q92572 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S1Q92572 AC004840.1-201ENST00000636359 365 ntBASIC12.77□□□□□ -0.37
AP3S1Q92572 GHET1-201ENST00000627071 1906 ntBASIC12.77□□□□□ -0.37
AP3S1Q92572 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.77□□□□□ -0.37
AP3S1Q92572 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S1Q92572 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.77□□□□□ -0.37
AP3S1Q92572 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.77□□□□□ -0.37
AP3S1Q92572 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S1Q92572 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.77□□□□□ -0.37
AP3S1Q92572 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.77□□□□□ -0.37
AP3S1Q92572 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S1Q92572 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
AP3S1Q92572 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S1Q92572 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S1Q92572 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S1Q92572 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC12.77□□□□□ -0.37
AP3S1Q92572 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S1Q92572 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.77□□□□□ -0.37
AP3S1Q92572 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.77□□□□□ -0.37
AP3S1Q92572 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.77□□□□□ -0.37
AP3S1Q92572 LINC01165-201ENST00000445190 1623 ntBASIC12.77□□□□□ -0.37
AP3S1Q92572 PCDHA6-201ENST00000378126 3267 ntBASIC12.77□□□□□ -0.37
AP3S1Q92572 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S1Q92572 AL138799.1-201ENST00000448213 1675 ntBASIC12.77□□□□□ -0.37
AP3S1Q92572 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.77□□□□□ -0.37
AP3S1Q92572 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S1Q92572 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
AP3S1Q92572 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.76□□□□□ -0.37
AP3S1Q92572 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
AP3S1Q92572 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.76□□□□□ -0.37
AP3S1Q92572 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
AP3S1Q92572 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
AP3S1Q92572 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.76□□□□□ -0.37
AP3S1Q92572 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms