Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.73□□□□□ -0.21
TM9SF4Q92544 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TM9SF4Q92544 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 MPRIPP1-201ENST00000452433 1089 ntBASIC13.72□□□□□ -0.21
TM9SF4Q92544 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 MIR4683-201ENST00000579659 81 ntBASIC13.72□□□□□ -0.21
TM9SF4Q92544 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 AC004466.1-201ENST00000599515 1080 ntBASIC13.72□□□□□ -0.21
TM9SF4Q92544 AC009884.2-201ENST00000603110 324 ntBASIC13.72□□□□□ -0.21
TM9SF4Q92544 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TM9SF4Q92544 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.72□□□□□ -0.21
TM9SF4Q92544 AC008132.1-202ENST00000342005 1389 ntBASIC13.71□□□□□ -0.21
TM9SF4Q92544 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF4Q92544 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF4Q92544 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TM9SF4Q92544 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF4Q92544 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.71□□□□□ -0.21
TM9SF4Q92544 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF4Q92544 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.71□□□□□ -0.21
TM9SF4Q92544 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF4Q92544 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TM9SF4Q92544 CICP17-201ENST00000418553 2377 ntBASIC13.71□□□□□ -0.21
TM9SF4Q92544 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF4Q92544 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF4Q92544 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF4Q92544 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF4Q92544 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF4Q92544 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TM9SF4Q92544 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
TM9SF4Q92544 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.71□□□□□ -0.21
TM9SF4Q92544 AC010141.1-201ENST00000411585 623 ntBASIC13.71□□□□□ -0.21
TM9SF4Q92544 AC104073.2-201ENST00000453737 312 ntBASIC13.71□□□□□ -0.21
TM9SF4Q92544 NUP210P1-202ENST00000504322 710 ntBASIC13.71□□□□□ -0.21
TM9SF4Q92544 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TM9SF4Q92544 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TM9SF4Q92544 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.71□□□□□ -0.21
TM9SF4Q92544 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms