Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNED1Q8TER0 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SNED1Q8TER0 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNED1Q8TER0 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SNED1Q8TER0 AL157823.1-201ENST00000403727 628 ntBASIC17.17■□□□□ 0.34
SNED1Q8TER0 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SNED1Q8TER0 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC17.17■□□□□ 0.34
SNED1Q8TER0 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC17.17■□□□□ 0.34
SNED1Q8TER0 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC17.17■□□□□ 0.34
SNED1Q8TER0 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
SNED1Q8TER0 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC17.17■□□□□ 0.34
SNED1Q8TER0 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNED1Q8TER0 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC17.17■□□□□ 0.34
SNED1Q8TER0 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC17.17■□□□□ 0.34
SNED1Q8TER0 GGNBP1-204ENST00000613113 887 ntBASIC17.17■□□□□ 0.34
SNED1Q8TER0 MIR6816-201ENST00000620368 66 ntBASIC17.17■□□□□ 0.34
SNED1Q8TER0 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNED1Q8TER0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNED1Q8TER0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.17■□□□□ 0.34
SNED1Q8TER0 AC023824.1-201ENST00000562945 2975 ntBASIC17.17■□□□□ 0.34
SNED1Q8TER0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNED1Q8TER0 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNED1Q8TER0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.17■□□□□ 0.34
SNED1Q8TER0 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNED1Q8TER0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
SNED1Q8TER0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SNED1Q8TER0 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNED1Q8TER0 DUT-208ENST00000559540 1441 ntTSL 2 BASIC17.16■□□□□ 0.34
SNED1Q8TER0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNED1Q8TER0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNED1Q8TER0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SNED1Q8TER0 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNED1Q8TER0 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC17.16■□□□□ 0.34
SNED1Q8TER0 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SNED1Q8TER0 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SNED1Q8TER0 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNED1Q8TER0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.16■□□□□ 0.34
SNED1Q8TER0 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SNED1Q8TER0 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNED1Q8TER0 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNED1Q8TER0 AP000244.1-201ENST00000424582 201 ntBASIC17.16■□□□□ 0.34
SNED1Q8TER0 RNLS-203ENST00000437752 525 ntTSL 2 BASIC17.16■□□□□ 0.34
SNED1Q8TER0 GOLGA6L16P-201ENST00000441780 1299 ntBASIC17.16■□□□□ 0.34
SNED1Q8TER0 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC17.16■□□□□ 0.34
SNED1Q8TER0 EMC4-208ENST00000559078 599 ntTSL 3 BASIC17.16■□□□□ 0.34
SNED1Q8TER0 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC17.16■□□□□ 0.34
SNED1Q8TER0 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SNED1Q8TER0 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC17.16■□□□□ 0.34
SNED1Q8TER0 MIR4746-201ENST00000579802 71 ntBASIC17.16■□□□□ 0.34
SNED1Q8TER0 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
SNED1Q8TER0 AL591424.3-201ENST00000614278 872 ntBASIC17.16■□□□□ 0.34
SNED1Q8TER0 AC090510.3-201ENST00000615831 821 ntBASIC17.16■□□□□ 0.34
SNED1Q8TER0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNED1Q8TER0 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNED1Q8TER0 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNED1Q8TER0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
SNED1Q8TER0 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNED1Q8TER0 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNED1Q8TER0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNED1Q8TER0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNED1Q8TER0 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNED1Q8TER0 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SNED1Q8TER0 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC17.16■□□□□ 0.34
SNED1Q8TER0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNED1Q8TER0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SNED1Q8TER0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.15■□□□□ 0.34
SNED1Q8TER0 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNED1Q8TER0 OR2W2P-201ENST00000406313 909 ntBASIC17.15■□□□□ 0.34
SNED1Q8TER0 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SNED1Q8TER0 AC023141.7-201ENST00000430646 407 ntBASIC17.15■□□□□ 0.34
SNED1Q8TER0 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC17.15■□□□□ 0.34
SNED1Q8TER0 AC100858.1-201ENST00000514059 1228 ntBASIC17.15■□□□□ 0.34
SNED1Q8TER0 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNED1Q8TER0 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC17.15■□□□□ 0.34
SNED1Q8TER0 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
SNED1Q8TER0 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC17.15■□□□□ 0.34
SNED1Q8TER0 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
SNED1Q8TER0 PRMT1P1-201ENST00000604252 1009 ntBASIC17.15■□□□□ 0.34
SNED1Q8TER0 URAHP-205ENST00000610227 398 ntBASIC17.15■□□□□ 0.34
SNED1Q8TER0 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNED1Q8TER0 AC139713.2-207ENST00000641556 1292 ntBASIC17.15■□□□□ 0.34
SNED1Q8TER0 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNED1Q8TER0 AC008536.3-201ENST00000623282 1599 ntBASIC17.15■□□□□ 0.34
SNED1Q8TER0 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
SNED1Q8TER0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNED1Q8TER0 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNED1Q8TER0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.15■□□□□ 0.34
SNED1Q8TER0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNED1Q8TER0 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNED1Q8TER0 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SNED1Q8TER0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNED1Q8TER0 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SNED1Q8TER0 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNED1Q8TER0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.15■□□□□ 0.34
SNED1Q8TER0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.15■□□□□ 0.34
SNED1Q8TER0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNED1Q8TER0 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNED1Q8TER0 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNED1Q8TER0 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SNED1Q8TER0 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms