Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 RN7SL818P-201ENST00000485099 259 ntBASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 RN7SL774P-201ENST00000577467 290 ntBASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 AL133499.1-201ENST00000596207 608 ntBASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 RN7SL725P-201ENST00000606439 259 ntBASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 AC023090.2-201ENST00000625182 2110 ntBASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC105Q8IYK2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC105Q8IYK2 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC105Q8IYK2 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC105Q8IYK2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC105Q8IYK2 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC105Q8IYK2 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC105Q8IYK2 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC105Q8IYK2 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC105Q8IYK2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC105Q8IYK2 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC105Q8IYK2 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC105Q8IYK2 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC105Q8IYK2 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC105Q8IYK2 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms