Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 AC007326.2-201ENST00000624224 7579 ntBASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 MIR645-201ENST00000385283 94 ntBASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 AL512430.1-201ENST00000392575 860 ntBASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 FXNP2-201ENST00000411625 547 ntBASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 AL592076.1-201ENST00000424448 303 ntBASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 NOC2LP1-201ENST00000450578 752 ntBASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 AC005632.3-201ENST00000605544 308 ntBASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 YRDCP1-201ENST00000621419 643 ntBASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC60Q8IWA6 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.96■□□□□ 0.14
CCDC60Q8IWA6 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.14
CCDC60Q8IWA6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC60Q8IWA6 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.96■□□□□ 0.14
CCDC60Q8IWA6 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC60Q8IWA6 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 AP000356.3-201ENST00000382243 753 ntBASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 RPS2P36-201ENST00000456516 831 ntBASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 MIR4722-201ENST00000578292 60 ntBASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 AC073352.2-201ENST00000609385 439 ntBASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC60Q8IWA6 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CCDC60Q8IWA6 AC074138.1-201ENST00000611182 1303 ntBASIC15.94■□□□□ 0.14
CCDC60Q8IWA6 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC60Q8IWA6 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC60Q8IWA6 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CCDC60Q8IWA6 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms