Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.38
LYSMD2Q8IV50 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LYSMD2Q8IV50 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LYSMD2Q8IV50 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LYSMD2Q8IV50 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LYSMD2Q8IV50 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LYSMD2Q8IV50 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LYSMD2Q8IV50 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LYSMD2Q8IV50 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LYSMD2Q8IV50 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
LYSMD2Q8IV50 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LYSMD2Q8IV50 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LYSMD2Q8IV50 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC12.71□□□□□ -0.38
LYSMD2Q8IV50 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
LYSMD2Q8IV50 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LYSMD2Q8IV50 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.71□□□□□ -0.38
LYSMD2Q8IV50 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 LINC02486-201ENST00000604157 3000 ntBASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 YBX2P1-201ENST00000394192 760 ntBASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 MCCD1P2-201ENST00000423228 335 ntBASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 AC004066.1-201ENST00000502488 802 ntBASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 AL033527.5-202ENST00000641632 1098 ntBASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYSMD2Q8IV50 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 HLA-K-203ENST00000430151 1046 ntBASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 AC005237.2-201ENST00000434368 219 ntBASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 AC026150.2-201ENST00000564693 1156 ntBASIC12.69□□□□□ -0.38
LYSMD2Q8IV50 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms