Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 U91328.1-201ENST00000437528 223 ntBASIC12.95□□□□□ -0.34
LRRC28Q86X40 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 RPSAP52-203ENST00000622976 1023 ntBASIC12.95□□□□□ -0.34
LRRC28Q86X40 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 AL138799.1-201ENST00000448213 1675 ntBASIC12.95□□□□□ -0.34
LRRC28Q86X40 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 PCDHA5-203ENST00000614258 4248 ntBASIC12.95□□□□□ -0.34
LRRC28Q86X40 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LRRC28Q86X40 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRRC28Q86X40 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRC28Q86X40 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 AGAP10P-201ENST00000454844 2418 ntBASIC12.94□□□□□ -0.34
LRRC28Q86X40 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRRC28Q86X40 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRC28Q86X40 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRRC28Q86X40 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRC28Q86X40 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRC28Q86X40 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRC28Q86X40 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 HSPA8P5-201ENST00000456928 2069 ntBASIC12.94□□□□□ -0.34
LRRC28Q86X40 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRRC28Q86X40 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRC28Q86X40 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 OR8S1-201ENST00000310194 1080 ntBASIC12.94□□□□□ -0.34
LRRC28Q86X40 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRC28Q86X40 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRRC28Q86X40 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRRC28Q86X40 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 TDH-203ENST00000531764 1110 ntBASIC12.94□□□□□ -0.34
LRRC28Q86X40 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRRC28Q86X40 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 PTP4A1P2-201ENST00000546033 454 ntBASIC12.94□□□□□ -0.34
LRRC28Q86X40 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 CLUHP6-201ENST00000580789 941 ntBASIC12.94□□□□□ -0.34
LRRC28Q86X40 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 BTNL10-201ENST00000595971 695 ntBASIC12.94□□□□□ -0.34
LRRC28Q86X40 AC008735.3-201ENST00000596646 500 ntBASIC12.94□□□□□ -0.34
LRRC28Q86X40 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRC28Q86X40 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRRC28Q86X40 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRC28Q86X40 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRC28Q86X40 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRC28Q86X40 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRRC28Q86X40 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRC28Q86X40 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRC28Q86X40 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms